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MH382836.1__AXC36526.1__phCDa_82__00082
Bact-VirMH382836.1__AXC36526.1__phCDa_82__00082
Identity
- Accession:
- MH382836 ↗
- Kingdom:
- phage
Quality
68.8
mean pLDDT
Taxonomy
TaxID: 2268587
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-101
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mb8D00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.70 | 60.0 | 4.06e-01 | 100.0% | 33.8% |
| 3o2sB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 54.0 | 4.43e-01 | 98.6% | 47.8% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 53.0 | 4.86e-01 | 97.2% | 84.7% |
| 1tr0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 52.0 | 4.62e-01 | 97.2% | 98.1% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 46.0 | 4.24e-01 | 83.1% | 86.3% |
| 5b08A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 50.0 | 4.61e-01 | 98.6% | 99.0% |
| 3ikhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 44.0 | 2.99e-01 | 80.3% | 31.5% |
| 1ibcB00 | 3.30.70.1470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Caspase-like | 0.59 | 49.0 | 4.59e-01 | 93.0% | 78.4% |
| 4m0mA04 | 1.20.1270.440 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 45.0 | 3.97e-01 | 87.3% | 91.5% |
| 6nqbF00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.58 | 49.0 | 4.79e-01 | 97.2% | 100.0% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 48.0 | 4.38e-01 | 98.6% | 96.1% |
| 2qm8A03 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.57 | 36.0 | 3.78e-01 | 77.5% | 69.2% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 46.0 | 4.28e-01 | 97.2% | 100.0% |
| 4j5tA01 | 2.70.98.110 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycosyl hydrolase family 63, N-terminal domain | 0.56 | 45.0 | 3.08e-01 | 95.8% | 69.0% |
| 2ifxA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 46.0 | 4.39e-01 | 97.2% | 100.0% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 40.0 | 3.42e-01 | 85.9% | 66.2% |
| 3er9B01 | 1.20.1270.320 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Poxvirus poly(A) polymerase, N domain | 0.53 | 41.0 | 3.66e-01 | 87.3% | 95.3% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.53 | 43.0 | 4.09e-01 | 100.0% | 92.6% |
| 1eteA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 41.0 | 3.35e-01 | 84.5% | 73.9% |
| 1vkcA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 45.0 | 3.64e-01 | 95.8% | 71.2% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 4.11e-01 | 100.0% | 98.9% |
| 3lmcA00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.51 | 36.0 | 2.72e-01 | 77.5% | 42.9% |
| 1jr8A00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.50 | 42.0 | 3.67e-01 | 90.1% | 69.5% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4565831 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.75 | 63.0 | 5.83e-01 | 93.0% | 75.6% |
| 1870490 | 3228.1.1.1 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Gp6_C-III | 0.73 | 63.0 | 6.20e-01 | 98.6% | 100.0% |
| 4957578 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.72 | 60.0 | 5.59e-01 | 95.8% | 74.4% |
| 4959193 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.71 | 55.0 | 5.20e-01 | 83.1% | 96.5% |
| 3943567 | 3228.1.1.0 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III | 0.67 | 56.0 | 5.08e-01 | 95.8% | 74.0% |
| 4534784 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.66 | 58.0 | 4.36e-01 | 100.0% | 92.8% |
| 3838738 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.66 | 51.0 | 4.29e-01 | 85.9% | 90.4% |
| 4476428 | 304.20.1.0 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0.65 | 55.0 | 4.23e-01 | 98.6% | 82.3% |
| 3277569 | 3087.1.1.1 ↗ | few secondary structure elements › CDGSH iron-sulfur domains › CDGSH iron-sulfur domains › Type 1 and 2 › zf-CDGSH | 0.64 | 51.0 | 4.78e-01 | 87.3% | 100.0% |
| 2140348 | 210.1.1.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits | 0.64 | 55.0 | 4.15e-01 | 100.0% | 94.7% |
| 3958050 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.63 | 55.0 | 5.13e-01 | 98.6% | 90.0% |
| 5049280 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 43.0 | 4.38e-01 | 71.8% | 80.0% |
| 3516871 | 4320.1.1.1 ↗ | alpha superhelices › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › TFIID_NTD2 | 0.62 | 46.0 | 3.48e-01 | 81.7% | 84.3% |
| 3371305 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.62 | 45.0 | 3.37e-01 | 77.5% | 97.2% |
| 5053700 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.62 | 51.0 | 4.06e-01 | 100.0% | 55.3% |
| 3219497 | 103.4.1.5 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 | 0.61 | 48.0 | 4.89e-01 | 85.9% | 91.4% |
| 3484717 | 304.28.1.19 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SCAP_N | 0.61 | 48.0 | 3.58e-01 | 88.7% | 95.5% |
| 4967469 | 304.110.1.1 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase | 0.61 | 52.0 | 4.52e-01 | 98.6% | 88.7% |
| 4100834 | 3223.1.1.1 ↗ | beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › ASC | 0.60 | 44.0 | 2.86e-01 | 76.1% | 99.0% |
| 3218555 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.60 | 42.0 | 3.36e-01 | 74.6% | 81.3% |
| 3693349 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.60 | 53.0 | 3.81e-01 | 98.6% | 75.1% |
| 5039449 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.59 | 40.0 | 3.57e-01 | 71.8% | 50.5% |
| 5075519 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.59 | 49.0 | 3.84e-01 | 100.0% | 52.0% |
| 3371275 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.58 | 42.0 | 3.25e-01 | 78.9% | 78.3% |
| 4120017 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.57 | 48.0 | 3.91e-01 | 95.8% | 92.1% |
| 3659915 | 192.7.1.45 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Na_sulph_symp | 0.57 | 38.0 | 3.82e-01 | 70.4% | 74.7% |
| 3337191 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.55 | 46.0 | 3.65e-01 | 97.2% | 77.4% |
| 4221060 | 6094.1.1.0 ↗ | a+b two layers › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase | 0.55 | 45.0 | 3.85e-01 | 91.5% | 55.8% |
| 3812487 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.55 | 46.0 | 3.86e-01 | 95.8% | 82.7% |
| 3591480 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.55 | 43.0 | 2.91e-01 | 83.1% | 59.2% |
| 4617422 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.55 | 48.0 | 3.83e-01 | 100.0% | 87.2% |
| 4410482 | 2003.1.5.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Ubie_methyltran | 0.55 | 35.0 | 2.51e-01 | 70.4% | 20.0% |
| 3520618 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.54 | 46.0 | 3.21e-01 | 95.8% | 70.6% |
| 134624 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.54 | 38.0 | 2.79e-01 | 78.9% | 30.1% |
| 3643161 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.54 | 42.0 | 2.79e-01 | 88.7% | 55.4% |
| 3878040 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.53 | 44.0 | 2.99e-01 | 100.0% | 89.7% |
| 3834057 | 109.4.1.585 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF627 | 0.52 | 40.0 | 2.58e-01 | 83.1% | 30.5% |
| 3985103 | 532.2.1.1 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › HrpJ | 0.52 | 41.0 | 3.82e-01 | 88.7% | 68.9% |
| 4268614 | 6094.1.1.0 ↗ | a+b two layers › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase | 0.52 | 40.0 | 3.48e-01 | 87.3% | 52.5% |
| 4514417 | 284.1.1.8 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase_3 | 0.52 | 43.0 | 3.81e-01 | 97.2% | 94.5% |
| 4016949 | 6094.1.1.3 ↗ | a+b two layers › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase › CurL-like_PKS_C | 0.51 | 40.0 | 3.62e-01 | 88.7% | 62.9% |
| 3992937 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.51 | 43.0 | 3.34e-01 | 95.8% | 72.1% |
| 3838399 | 2003.1.5.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Ubie_methyltran | 0.51 | 37.0 | 2.68e-01 | 80.3% | 36.3% |