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MH393889.1__AXY86154.1__susfortuna_gp14__00014

Bact-Vir

MH393889.1__AXY86154.1__susfortuna_gp14__00014

Identity

Accession:
MH393889 ↗
Kingdom:
phage

Quality

95.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Guelinviridae› Susfortunavirus› Clostridium_phage_susfortuna

TaxID: 2316154

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.64 46.0 4.91e-01 86.4% 97.9%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 45.0 4.70e-01 93.2% 83.6%
3e66A01 3.30.420.230 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Prp8 RNase H domain, palm region 0.62 48.0 3.49e-01 83.1% 34.8%
4dt4A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 37.0 3.76e-01 71.2% 61.4%
1pn2B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 47.0 3.63e-01 86.4% 85.1%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.61 42.0 3.33e-01 79.7% 31.9%
4tw1B00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.60 48.0 3.14e-01 91.5% 77.3%
1d6uA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.60 45.0 2.74e-01 83.1% 16.1%
1jv2B04 4.10.1240.30 Few Secondary Structures › Irregular › Hormone receptor fold › 0.60 37.0 3.31e-01 91.5% 41.9%
4kc3A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 49.0 3.93e-01 100.0% 94.2%
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 47.0 4.53e-01 98.3% 85.7%
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.57 41.0 3.38e-01 74.6% 49.5%
2k7iA01 3.30.160.160 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like 0.57 38.0 4.04e-01 79.7% 87.5%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 47.0 3.78e-01 96.6% 59.1%
1jkmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 47.0 2.90e-01 94.9% 16.8%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 46.0 3.38e-01 94.9% 79.5%
1h7zA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.55 39.0 2.82e-01 78.0% 30.9%
4yfbC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.55 38.0 3.55e-01 74.6% 61.5%
2hn1A01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.55 38.0 3.03e-01 76.3% 89.4%
6kcvA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 41.0 2.78e-01 83.1% 52.7%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.54 42.0 3.23e-01 88.1% 97.4%
2vhjA02 2.30.270.20 Mainly Beta › Roll › duf1285 protein fold › 0.54 30.0 3.02e-01 93.2% 46.8%
1iyxA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 42.0 3.42e-01 89.8% 92.8%
4eo0A00 3.30.110.160 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.54 39.0 3.34e-01 81.4% 81.1%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.65e-01 91.5% 59.5%
3e8tA00 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.53 42.0 2.95e-01 91.5% 62.0%
6x6aA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 39.0 2.56e-01 81.4% 32.4%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 46.0 4.33e-01 100.0% 84.7%
4hh3A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 42.0 3.54e-01 94.9% 71.9%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.53 44.0 3.59e-01 100.0% 51.2%
5l8sA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 41.0 2.74e-01 98.3% 20.2%
1r77A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 39.0 3.38e-01 83.1% 59.6%
7c5wA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 40.0 3.20e-01 93.2% 90.5%
4hiaA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 36.0 2.64e-01 74.6% 30.1%
3f14A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 38.0 3.21e-01 84.7% 43.8%
2xe4A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 41.0 2.59e-01 93.2% 17.3%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 33.0 3.60e-01 86.4% 81.2%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.51 42.0 3.06e-01 96.6% 83.9%
5cmlA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 36.0 2.42e-01 74.6% 90.4%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.51 42.0 3.23e-01 100.0% 54.7%
3lyxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 40.0 3.35e-01 94.9% 72.5%
3ugfB02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.50 42.0 3.11e-01 100.0% 74.0%
1fguB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 40.0 3.30e-01 94.9% 81.5%
3jvgA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.50 38.0 2.92e-01 91.5% 87.9%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5033648 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.78 54.0 5.71e-01 72.9% 86.0%
4954491 375.1.1.135 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Lar_restr_allev 0.72 52.0 5.38e-01 79.7% 81.8%
3856050 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.68 48.0 3.30e-01 83.1% 22.6%
3997937 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.65 41.0 2.85e-01 81.4% 19.0%
4998035 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 47.0 4.91e-01 88.1% 96.0%
3238553 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.62 41.0 2.94e-01 81.4% 22.2%
3726406 12.3.1.2 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.62 46.0 2.75e-01 81.4% 15.3%
None — 0.60 42.0 2.60e-01 72.9% 98.8%
3531090 223.2.1.6 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.60 42.0 3.11e-01 81.4% 25.7%
3236367 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.60 50.0 3.91e-01 100.0% 80.7%
4981303 284.4.1.0 ↗ a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.60 36.0 3.72e-01 71.2% 63.6%
3382312 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.60 47.0 3.13e-01 91.5% 22.9%
3882550 11.1.1.851 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26192 0.59 43.0 3.01e-01 78.0% 83.6%
4960238 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 42.0 4.51e-01 81.4% 92.0%
3916303 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.59 42.0 2.62e-01 76.3% 50.4%
3440342 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 47.0 3.86e-01 89.8% 70.4%
3306744 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 49.0 2.88e-01 96.6% 13.2%
3452536 11.1.1.851 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26192 0.59 42.0 3.12e-01 78.0% 98.8%
3879829 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.59 42.0 2.63e-01 76.3% 52.6%
4987289 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 43.0 2.60e-01 83.1% 40.0%
3240745 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 46.0 2.86e-01 93.2% 15.6%
3204334 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.58 43.0 4.58e-01 94.9% 94.0%
3497129 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 47.0 4.04e-01 96.6% 63.8%
3467205 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.58 45.0 2.72e-01 91.5% 13.5%
3496242 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 41.0 4.28e-01 86.4% 94.0%
5004850 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.58 41.0 4.30e-01 89.8% 92.0%
4091312 2.1.1.26 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB 0.57 41.0 3.76e-01 89.8% 55.3%
5054433 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 41.0 4.36e-01 88.1% 94.0%
4294583 10.2.1.31 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin 0.57 41.0 3.23e-01 76.3% 41.7%
3623902 223.2.1.4 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.57 40.0 3.04e-01 81.4% 28.1%
3467186 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 46.0 2.76e-01 94.9% 13.4%
3301697 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.57 47.0 2.83e-01 94.9% 15.2%
4629131 9.29.1.1 ↗ beta barrels › Lipocalins/Streptavidin › VirK › VirK › VirK 0.56 44.0 3.60e-01 91.5% 43.1%
4261005 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.56 41.0 2.76e-01 81.4% 30.2%
3586413 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 41.0 3.36e-01 83.1% 59.2%
3845121 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.56 41.0 2.83e-01 79.7% 33.6%
3968741 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 38.0 2.83e-01 74.6% 26.2%
3637417 4099.1.1.10 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.55 41.0 2.89e-01 83.1% 24.8%
4119667 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.55 45.0 4.06e-01 93.2% 82.4%
3596066 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 43.0 3.60e-01 94.9% 80.8%
3902971 5.1.3.9 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.54 45.0 2.99e-01 100.0% 21.1%
3249225 223.2.1.6 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.54 40.0 3.04e-01 83.1% 41.9%
3339690 9.23.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 0.54 45.0 3.51e-01 96.6% 52.6%
3439646 284.1.3.2 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.54 38.0 3.29e-01 78.0% 50.5%
3758281 223.2.1.4 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.54 40.0 2.98e-01 86.4% 32.2%
3593291 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 37.0 2.93e-01 79.7% 31.0%
3998279 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.53 42.0 3.58e-01 93.2% 60.0%
3907024 260.1.1.1 ↗ a+b duplicates or obligate multimers › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › Plectin 0.53 43.0 2.77e-01 93.2% 25.0%
3929583 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.53 39.0 2.92e-01 86.4% 58.4%
3472961 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 38.0 2.96e-01 79.7% 32.7%
5023504 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.53 41.0 2.51e-01 96.6% 11.1%
4959715 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 41.0 2.67e-01 100.0% 22.3%
4675181 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.52 43.0 3.72e-01 94.9% 63.2%
3221726 7579.1.1.70 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF1057 0.52 37.0 2.44e-01 79.7% 26.2%
3997433 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.52 42.0 2.89e-01 100.0% 24.2%
3947188 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 42.0 3.59e-01 96.6% 55.2%
3299054 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 39.0 2.48e-01 89.8% 96.8%
3802472 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.51 41.0 2.75e-01 100.0% 26.6%
3453774 9.23.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin 0.51 41.0 3.11e-01 96.6% 60.4%
3828471 9.23.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 0.50 41.0 3.26e-01 96.6% 50.7%