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MH426724.1__AXF51206.1__WELLINGTON_76__00068

Bact-Vir

MH426724.1__AXF51206.1__WELLINGTON_76__00068

Identity

Accession:
MH426724 ↗
Kingdom:
phage

Quality

78.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Wellingtonvirus› Erwinia_phage_Wellington

TaxID: 2267653

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-58
PDB
Domain cluster: representative
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3355714 3364.1.1.2 ↗ few secondary structure elements › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › EPF 0.61 43.0 4.31e-01 90.4% 72.2%
4060126 325.1.7.54 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › PF25964 0.52 42.0 3.56e-01 100.0% 74.0%
D2 high residues 77-180
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hwdD00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.67 51.0 5.42e-01 94.2% 91.1%
4k0dA00 1.20.120.1730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.67 52.0 4.69e-01 100.0% 60.1%
3kavA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.67 45.0 4.57e-01 94.2% 70.6%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.65 48.0 5.25e-01 98.1% 93.1%
1cgnA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.65 55.0 5.23e-01 100.0% 78.2%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 58.0 5.92e-01 99.0% 100.0%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.64 49.0 4.83e-01 100.0% 75.2%
6a3kA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.64 55.0 5.19e-01 100.0% 76.7%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 41.0 4.74e-01 81.7% 88.5%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.64 41.0 3.80e-01 96.2% 51.1%
2hujA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.63 53.0 4.98e-01 100.0% 75.2%
1hciA04 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 56.0 5.45e-01 100.0% 90.4%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.61 55.0 5.46e-01 100.0% 94.4%
2iakA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 53.0 4.31e-01 100.0% 51.0%
1owaA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 54.0 5.44e-01 100.0% 95.3%
2odmA00 1.10.287.750 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like 0.61 44.0 4.89e-01 99.0% 100.0%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 38.0 4.34e-01 88.5% 87.8%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.60 50.0 5.16e-01 100.0% 96.9%
3edvB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 53.0 4.87e-01 100.0% 76.5%
4l8eA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 44.0 4.32e-01 91.3% 75.5%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 51.0 5.10e-01 100.0% 98.1%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.57 48.0 4.97e-01 99.0% 100.0%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 49.0 5.03e-01 94.2% 97.1%
1w0bA01 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.57 43.0 4.55e-01 96.2% 90.2%
2gtaA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.57 38.0 3.97e-01 76.9% 73.2%
1a7eA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.57 40.0 3.89e-01 96.2% 64.4%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.57 51.0 4.42e-01 100.0% 75.6%
3fb2A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 51.0 5.11e-01 100.0% 97.1%
3f4mA00 1.20.1440.160 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like 0.56 42.0 3.79e-01 99.0% 54.5%
3gehA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.56 47.0 4.07e-01 93.3% 58.7%
1jmwA00 1.20.120.30 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain 0.56 46.0 4.08e-01 92.3% 63.0%
3evyA00 1.20.58.910 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 40.0 4.33e-01 93.3% 95.2%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 29.0 2.74e-01 77.9% 42.3%
6t0bc02 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.54 47.0 3.91e-01 100.0% 53.4%
1sj7C00 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.53 43.0 3.73e-01 95.2% 55.4%
2hz8A00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.53 42.0 4.09e-01 97.1% 77.4%
4l3uA00 1.20.1480.40 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 0.53 36.0 3.42e-01 91.3% 58.5%
3nrxA00 1.20.58.1520 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 45.0 4.25e-01 95.2% 78.0%
7p3rA01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.52 46.0 3.28e-01 100.0% 83.1%
5dkoA02 1.10.3900.10 Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like 0.52 45.0 3.88e-01 98.1% 78.4%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.52 46.0 4.54e-01 96.2% 92.7%
3lszA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 40.0 3.77e-01 92.3% 69.6%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.51 37.0 3.21e-01 76.0% 88.8%
6xj1A01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.51 36.0 2.71e-01 73.1% 71.8%
1qu7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.50 36.0 2.77e-01 74.0% 36.6%
7aalA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.50 35.0 2.64e-01 73.1% 69.5%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3496462 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.64 53.0 5.48e-01 99.0% 92.0%
3559718 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.63 57.0 5.61e-01 100.0% 91.8%
3498465 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.63 53.0 4.93e-01 98.1% 74.4%
3522858 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.63 58.0 5.82e-01 100.0% 100.0%
3564106 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.62 56.0 5.67e-01 100.0% 97.1%
3894879 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.62 56.0 5.60e-01 100.0% 96.2%
3489767 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.62 55.0 5.18e-01 100.0% 80.8%
3915047 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.61 52.0 5.23e-01 100.0% 90.5%
3581461 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.61 55.0 5.28e-01 100.0% 85.0%
3484930 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.61 54.0 5.44e-01 100.0% 96.2%
3750020 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.60 54.0 5.46e-01 100.0% 96.2%
3504338 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.60 55.0 5.36e-01 100.0% 90.4%
3876659 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 54.0 4.01e-01 100.0% 39.9%
3921192 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.60 55.0 5.37e-01 100.0% 96.5%
3841673 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.60 53.0 5.38e-01 100.0% 99.0%
3896888 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.60 55.0 5.15e-01 100.0% 84.0%
4949854 601.18.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 0.60 44.0 4.32e-01 100.0% 71.7%
4954407 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.60 51.0 5.15e-01 100.0% 92.4%
3992691 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.59 53.0 5.31e-01 100.0% 96.2%
3749998 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.59 54.0 5.15e-01 100.0% 85.8%
3504301 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 54.0 5.33e-01 100.0% 95.5%
3544537 604.1.1.63 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 0.59 54.0 5.22e-01 99.0% 100.0%
3585899 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.59 53.0 5.20e-01 100.0% 92.7%
3269637 603.1.1.105 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 0.59 54.0 5.23e-01 99.0% 89.6%
3912433 603.1.1.5 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.59 53.0 4.90e-01 100.0% 83.0%
3220229 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.59 52.0 4.99e-01 100.0% 85.0%
4402843 604.1.1.20 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › AKNA 0.58 51.0 4.98e-01 94.2% 88.7%
3756566 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.58 52.0 3.57e-01 100.0% 28.9%
3750000 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.58 51.0 5.13e-01 100.0% 96.2%
3904072 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.58 53.0 5.14e-01 100.0% 100.0%
2325657 601.4.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.57 48.0 4.40e-01 100.0% 70.8%
3938458 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 50.0 3.39e-01 100.0% 26.6%
3918068 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.56 50.0 4.92e-01 100.0% 89.6%
3915114 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 50.0 4.69e-01 100.0% 88.5%
3625926 604.3.1.11 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 0.55 49.0 3.72e-01 99.0% 43.5%
3062952 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 39.0 3.95e-01 99.0% 73.1%
4018180 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.55 50.0 3.74e-01 100.0% 46.7%
3268806 603.1.1.5 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.55 49.0 4.68e-01 100.0% 87.2%
3692058 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.55 49.0 4.31e-01 97.1% 68.7%
4259085 3755.4.1.66 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › MCPsignal 0.54 38.0 2.73e-01 73.1% 68.6%
4005523 3860.1.1.167 ↗ alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › MscS_porin 0.54 39.0 3.35e-01 75.0% 52.5%
3237394 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.53 46.0 4.14e-01 100.0% 69.0%
3224283 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 47.0 3.90e-01 100.0% 59.5%
3966368 603.5.1.0 ↗ alpha bundles › STAT-like › FlgN-like › FlgN-like 0.53 48.0 4.70e-01 100.0% 97.4%
3400732 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.52 45.0 4.37e-01 100.0% 85.0%
3634960 603.1.1.5 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.52 46.0 4.60e-01 100.0% 95.5%
3428894 604.5.1.39 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PF26581 0.52 47.0 4.24e-01 100.0% 90.0%
5006211 1079.1.1.8 ↗ alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › LysE 0.51 41.0 3.48e-01 90.4% 78.9%
3408094 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.51 45.0 4.18e-01 100.0% 88.9%
3400711 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.51 45.0 3.16e-01 100.0% 31.6%
3995987 192.29.1.31 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › CRIC_ras_sig 0.51 42.0 3.82e-01 98.1% 66.9%