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MH445380.1__AXN57515.1__X__00074
Bact-VirMH445380.1__AXN57515.1__X__00074
Identity
- Accession:
- MH445380 ↗
- Kingdom:
- phage
Quality
91.8
mean pLDDT
Taxonomy
TaxID: 2886926
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-61
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00872.25 best | Transposase_mut | 43.7 | 2.40e-11 | 100.0% | 14.2% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2n3zA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 39.0 | 3.22e-01 | 100.0% | 36.4% |
| 3mpkA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 39.0 | 3.30e-01 | 98.2% | 42.1% |
| 3oqvA00 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.57 | 48.0 | 3.37e-01 | 100.0% | 72.0% |
| 1pq4A01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.57 | 45.0 | 3.42e-01 | 92.9% | 55.3% |
| 4j1qA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 47.0 | 2.88e-01 | 100.0% | 42.4% |
| 3epnB01 | 3.20.20.540 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Radical SAM ThiC family, central domain | 0.56 | 48.0 | 3.05e-01 | 98.2% | 28.4% |
| 7ejgC01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 35.0 | 2.98e-01 | 98.2% | 41.8% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3326257 | 2484.1.1.110 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE | 0.92 | 80.0 | 4.94e-01 | 100.0% | 18.9% |
| 3952404 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.92 | 83.0 | 5.91e-01 | 100.0% | 36.7% |
| 3355851 | 2484.1.1.110 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE | 0.88 | 80.0 | 4.90e-01 | 100.0% | 19.7% |
| 3956733 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.86 | 76.0 | 4.70e-01 | 100.0% | 18.6% |
| 3958663 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.84 | 74.0 | 5.11e-01 | 100.0% | 30.6% |
| 3590178 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.84 | 75.0 | 4.65e-01 | 100.0% | 19.0% |
| 3958888 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.83 | 73.0 | 5.24e-01 | 100.0% | 35.5% |
| None | — | 0.82 | 68.0 | 4.25e-01 | 100.0% | 17.6% | |
| 3960025 | 605.1.1.13 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Transposase_mut | 0.81 | 71.0 | 5.74e-01 | 100.0% | 52.4% |
| 3990109 | 2484.1.1.102 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_ISL3 | 0.80 | 72.0 | 5.35e-01 | 98.2% | 54.8% |
| 3959778 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.80 | 69.0 | 4.66e-01 | 100.0% | 26.8% |
| 3960578 | 633.16.1.0 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like | 0.80 | 68.0 | 5.55e-01 | 98.2% | 51.4% |
| 3891733 | 632.10.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Coronavirus NSP7-like › Coronavirus NSP7-like | 0.78 | 65.0 | 5.36e-01 | 96.4% | 61.0% |
| 5053361 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.76 | 68.0 | 4.33e-01 | 100.0% | 24.2% |
| 3442788 | 2484.1.1.110 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE | 0.75 | 64.0 | 4.21e-01 | 100.0% | 22.9% |
| None | — | 0.74 | 65.0 | 4.23e-01 | 100.0% | 28.0% | |
| 3376457 | 2484.1.1.110 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE | 0.73 | 57.0 | 4.81e-01 | 100.0% | 50.0% |
| 3982704 | 2484.1.1.115 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS66 | 0.68 | 60.0 | 4.48e-01 | 100.0% | 41.4% |
| 2048141 | 2007.1.14.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › ZnuA | 0.60 | 43.0 | 3.68e-01 | 100.0% | 47.3% |
| 4610391 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 48.0 | 3.68e-01 | 100.0% | 54.2% |
| 4417589 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.57 | 51.0 | 3.49e-01 | 98.2% | 31.7% |
| 5016403 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.56 | 38.0 | 3.17e-01 | 98.2% | 42.1% |
| 3269272 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.53 | 44.0 | 3.23e-01 | 100.0% | 56.5% |
| 5060878 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 35.0 | 2.87e-01 | 100.0% | 35.7% |
| 4273752 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.51 | 35.0 | 3.17e-01 | 100.0% | 48.3% |
| 4034127 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 41.0 | 3.17e-01 | 100.0% | 67.7% |
| 1518785 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 34.0 | 2.96e-01 | 98.2% | 42.6% |
| 5002875 | 2484.3.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N | 0.50 | 41.0 | 3.16e-01 | 100.0% | 38.5% |
| 4941413 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.50 | 32.0 | 2.97e-01 | 100.0% | 48.0% |