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MH445381.1__AXN57562.1__X__00009

Bact-Vir

MH445381.1__AXN57562.1__X__00009

Identity

Accession:
MH445381 ↗
Kingdom:
phage

Quality

65.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Punavirus› Escherichia_phage_P1

TaxID: 2886926

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-61
PDB
D2 medium residues 63-105
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4p1mB01 3.30.160.880 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain 0.62 42.0 4.16e-01 76.7% 66.7%
4joiC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 48.0 3.67e-01 97.7% 48.3%
2pmbA01 3.30.1850.10 Alpha Beta › 2-Layer Sandwich › MCP/YpsA-like › MoCo carrier protein-like 0.58 43.0 3.36e-01 83.7% 94.4%
1f2uB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 36.0 2.49e-01 93.0% 17.9%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 34.0 2.12e-01 79.1% 9.8%
4i1sB00 4.10.80.340 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › 0.54 40.0 3.84e-01 100.0% 69.2%
4n01A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.51 43.0 3.25e-01 100.0% 95.7%
2b0aA00 3.50.30.50 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Putative cyclase 0.50 39.0 2.76e-01 100.0% 95.2%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4271291 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.96 89.0 7.38e-01 100.0% 64.3%
4946739 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.66 44.0 3.97e-01 72.1% 89.2%
4101701 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 44.0 4.54e-01 76.7% 85.0%
4987387 219.1.1.76 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.62 45.0 2.94e-01 79.1% 65.8%
4930970 375.1.1.338 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7479 0.54 42.0 4.05e-01 95.3% 90.9%
4778874 3423.1.1.3 ↗ a+b three layers › Nonstructural protein V › Nonstructural protein V › Nonstructural protein V › zf-Paramyx-P 0.54 40.0 3.84e-01 100.0% 69.2%
5047849 1.1.4.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.51 36.0 2.95e-01 79.1% 80.0%