←Back to structures
MH445500.1__AWY02852.1__X__00055
Bact-VirMH445500.1__AWY02852.1__X__00055
Identity
- Accession:
- MH445500 ↗
- Kingdom:
- phage
Quality
94.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-78
Domain cluster:
rep: MZ326860.1__QYW02164.1__CPT_Sonora_063__00061__D3-71
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jn7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.74 | 50.0 | 4.28e-01 | 75.3% | 43.7% |
| 2ra8A01 | 2.20.140.10 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain | 0.69 | 54.0 | 5.45e-01 | 89.0% | 82.4% |
| 3msyA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.68 | 48.0 | 4.17e-01 | 75.3% | 48.6% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.63 | 44.0 | 3.64e-01 | 74.0% | 92.5% |
| 3w15A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 51.0 | 3.30e-01 | 95.9% | 19.5% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 37.0 | 3.95e-01 | 76.7% | 68.3% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.62 | 45.0 | 4.08e-01 | 76.7% | 59.2% |
| 1okjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 40.0 | 3.77e-01 | 74.0% | 52.6% |
| 2rqlA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.60 | 51.0 | 4.79e-01 | 100.0% | 78.9% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 47.0 | 3.84e-01 | 89.0% | 96.7% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 45.0 | 3.38e-01 | 80.8% | 78.9% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.60 | 35.0 | 3.43e-01 | 72.6% | 50.0% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 44.0 | 3.54e-01 | 80.8% | 92.2% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 47.0 | 4.91e-01 | 97.3% | 97.0% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.58 | 49.0 | 4.50e-01 | 100.0% | 91.2% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 38.0 | 3.34e-01 | 71.2% | 45.4% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.57 | 48.0 | 3.92e-01 | 100.0% | 85.2% |
| 2iecD00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.57 | 40.0 | 3.44e-01 | 72.6% | 59.0% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 46.0 | 4.31e-01 | 91.8% | 80.9% |
| 2w18A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 47.0 | 3.10e-01 | 90.4% | 31.0% |
| 3dzzA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 48.0 | 4.00e-01 | 100.0% | 65.5% |
| 3cjmA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.57 | 45.0 | 3.16e-01 | 94.5% | 25.5% |
| 4hesA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.57 | 45.0 | 3.13e-01 | 93.2% | 24.0% |
| 4bg7A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.57 | 44.0 | 4.02e-01 | 84.9% | 64.3% |
| 4mlgG00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 48.0 | 3.14e-01 | 94.5% | 34.9% |
| 1e3hA03 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.56 | 43.0 | 3.11e-01 | 83.6% | 61.0% |
| 3wlvA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.56 | 42.0 | 2.78e-01 | 80.8% | 63.7% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.56 | 41.0 | 3.99e-01 | 80.8% | 70.2% |
| 8aa0E01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 47.0 | 3.17e-01 | 97.3% | 81.0% |
| 3kg6C00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.55 | 44.0 | 3.02e-01 | 89.0% | 71.8% |
| 3k7uC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 38.0 | 3.53e-01 | 74.0% | 87.8% |
| 2g8kA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 39.0 | 3.34e-01 | 79.5% | 43.4% |
| 4ewfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 44.0 | 3.11e-01 | 94.5% | 26.1% |
| 3k5iA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.54 | 47.0 | 3.52e-01 | 100.0% | 60.1% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 47.0 | 4.28e-01 | 98.6% | 90.9% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.54 | 48.0 | 3.89e-01 | 100.0% | 60.0% |
| 4oocA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.54 | 41.0 | 2.88e-01 | 84.9% | 70.9% |
| 3vb0A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 37.0 | 2.99e-01 | 84.9% | 33.8% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.62e-01 | 87.7% | 87.5% |
| 3vz9B00 | 3.30.457.50 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 | 0.53 | 45.0 | 4.11e-01 | 98.6% | 86.4% |
| 2ic2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.45e-01 | 76.7% | 85.6% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.53 | 43.0 | 3.39e-01 | 93.2% | 73.3% |
| 1s1dA00 | 2.120.10.100 | Mainly Beta › 6 Propeller › Neuraminidase › Apyrase | 0.53 | 45.0 | 3.06e-01 | 100.0% | 90.9% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 44.0 | 3.55e-01 | 100.0% | 79.3% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 44.0 | 3.55e-01 | 100.0% | 83.2% |
| 3m2tA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 45.0 | 3.65e-01 | 100.0% | 79.6% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.52 | 46.0 | 3.32e-01 | 100.0% | 84.8% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.52 | 43.0 | 3.65e-01 | 93.2% | 80.0% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 35.0 | 3.86e-01 | 72.6% | 88.1% |
| 2ex2A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 41.0 | 3.01e-01 | 94.5% | 30.6% |
| 2wuqB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 42.0 | 2.91e-01 | 94.5% | 25.8% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.51 | 42.0 | 3.54e-01 | 94.5% | 69.9% |
| 2wtzA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.51 | 43.0 | 3.10e-01 | 97.3% | 49.6% |
| 2ei0A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 35.0 | 2.81e-01 | 79.5% | 34.2% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.51 | 43.0 | 3.61e-01 | 100.0% | 57.9% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.50 | 37.0 | 3.88e-01 | 80.8% | 92.1% |
| 2c4iA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.50 | 42.0 | 3.72e-01 | 100.0% | 92.4% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3388135 | 4292.2.1.1 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › FlaG | 0.75 | 61.0 | 6.08e-01 | 94.5% | 85.3% |
| 3947082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.74 | 58.0 | 5.46e-01 | 93.2% | 70.0% |
| 3690349 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.69 | 53.0 | 3.19e-01 | 100.0% | 11.8% |
| 3592741 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 56.0 | 5.37e-01 | 93.2% | 82.4% |
| 3596303 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 59.0 | 5.86e-01 | 100.0% | 100.0% |
| 3367231 | 3116.1.1.1 ↗ | a+b two layers › Probable 30S ribosomal protein PSRP-3 › Probable 30S ribosomal protein PSRP-3 › Probable 30S ribosomal protein PSRP-3 › PSRP-3_Ycf65 | 0.67 | 48.0 | 4.69e-01 | 75.3% | 68.8% |
| 3599361 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.67 | 50.0 | 3.57e-01 | 79.5% | 28.2% |
| 3615641 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.67 | 55.0 | 5.28e-01 | 93.2% | 83.5% |
| 3932481 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.66 | 48.0 | 4.00e-01 | 76.7% | 53.1% |
| 4025365 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.65 | 46.0 | 4.01e-01 | 74.0% | 50.0% |
| 3589620 | 4312.1.1.11 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE-like_toxin | 0.65 | 42.0 | 3.99e-01 | 82.2% | 54.4% |
| 4432847 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.64 | 56.0 | 3.93e-01 | 97.3% | 53.2% |
| 3952939 | 220.1.1.82 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 | 0.64 | 42.0 | 4.21e-01 | 75.3% | 65.3% |
| 4945424 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 40.0 | 3.29e-01 | 74.0% | 34.6% |
| 3958768 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 42.0 | 4.09e-01 | 75.3% | 61.3% |
| 4985494 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.64 | 58.0 | 3.48e-01 | 100.0% | 24.2% |
| 3974494 | 330.1.1.34 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DUF6348 | 0.64 | 53.0 | 4.92e-01 | 95.9% | 92.6% |
| 4946613 | 512.1.1.5 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_3rd | 0.63 | 51.0 | 3.78e-01 | 100.0% | 33.0% |
| 3944846 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.63 | 49.0 | 4.28e-01 | 93.2% | 54.8% |
| 3080512 | 330.2.1.1 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE | 0.63 | 54.0 | 4.97e-01 | 100.0% | 80.4% |
| 4966375 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 57.0 | 3.40e-01 | 100.0% | 24.0% |
| 4588045 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.63 | 53.0 | 4.22e-01 | 100.0% | 73.3% |
| 3289156 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.62 | 51.0 | 4.39e-01 | 91.8% | 85.8% |
| 4150492 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 53.0 | 3.80e-01 | 100.0% | 55.4% |
| 4951664 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.61 | 50.0 | 3.94e-01 | 89.0% | 56.0% |
| 4090939 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.61 | 52.0 | 5.06e-01 | 98.6% | 98.8% |
| 3284940 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.61 | 52.0 | 2.98e-01 | 94.5% | 11.2% |
| 3215886 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 48.0 | 3.87e-01 | 89.0% | 76.0% |
| 3750853 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.60 | 50.0 | 4.34e-01 | 95.9% | 62.5% |
| 3224914 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.60 | 41.0 | 3.65e-01 | 75.3% | 46.1% |
| 4344957 | 330.2.1.1 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE | 0.60 | 50.0 | 4.58e-01 | 100.0% | 73.3% |
| 3734117 | 2008.1.1.99 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_12 | 0.59 | 50.0 | 3.61e-01 | 100.0% | 82.9% |
| 5053654 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 39.0 | 3.42e-01 | 71.2% | 41.7% |
| 4941519 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 50.0 | 3.21e-01 | 98.6% | 56.0% |
| 3253183 | 328.8.1.1 ↗ | a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › SLFN_AlbA_2 | 0.58 | 49.0 | 3.42e-01 | 97.3% | 29.1% |
| 4394739 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.58 | 48.0 | 4.90e-01 | 98.6% | 98.6% |
| 3973778 | 3982.1.1.0 ↗ | a+b complex topology › lantibiotic self-resistance lipoprotein MlbQ › lantibiotic self-resistance lipoprotein MlbQ › lantibiotic self-resistance lipoprotein MlbQ | 0.58 | 47.0 | 4.34e-01 | 94.5% | 73.0% |
| 3550970 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.58 | 42.0 | 3.72e-01 | 78.1% | 90.9% |
| 3589803 | 2484.1.1.144 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 | 0.58 | 39.0 | 3.62e-01 | 78.1% | 52.0% |
| 3412171 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.58 | 51.0 | 3.03e-01 | 100.0% | 18.9% |
| 4087213 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.58 | 48.0 | 4.83e-01 | 98.6% | 97.3% |
| 4927398 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.57 | 42.0 | 3.36e-01 | 82.2% | 36.8% |
| 3183932 | 5.1.2.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N | 0.57 | 47.0 | 3.14e-01 | 91.8% | 75.6% |
| 4964119 | 300.1.1.18 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle | 0.57 | 48.0 | 3.77e-01 | 94.5% | 70.6% |
| 5047074 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.57 | 50.0 | 3.17e-01 | 100.0% | 26.2% |
| 5060162 | 66.1.1.4 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › FtrD-like | 0.56 | 47.0 | 4.04e-01 | 95.9% | 86.3% |
| 3670595 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 45.0 | 4.19e-01 | 91.8% | 74.7% |
| 5073213 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.56 | 42.0 | 3.07e-01 | 82.2% | 45.5% |
| 4312097 | 295.1.1.15 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0128 | 0.56 | 46.0 | 3.57e-01 | 93.2% | 88.0% |
| 3387142 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 40.0 | 3.00e-01 | 78.1% | 28.9% |
| 3933294 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 48.0 | 4.34e-01 | 100.0% | 84.8% |
| 160941 | 330.1.1.19 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_2 | 0.56 | 45.0 | 3.95e-01 | 93.2% | 62.2% |
| 3805475 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.55 | 47.0 | 3.14e-01 | 98.6% | 52.0% |
| 3699929 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 41.0 | 3.21e-01 | 80.8% | 95.9% |
| 3224773 | 5.1.4.589 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7911 | 0.55 | 47.0 | 3.17e-01 | 97.3% | 78.0% |
| 3512065 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 38.0 | 3.99e-01 | 75.3% | 81.5% |
| 3245132 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.55 | 38.0 | 3.22e-01 | 72.6% | 51.5% |
| 4993189 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 40.0 | 4.34e-01 | 91.8% | 96.7% |
| 3501861 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 45.0 | 4.13e-01 | 97.3% | 68.6% |
| 4500970 | 2007.1.2.42 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › PF29770 | 0.54 | 47.0 | 3.58e-01 | 100.0% | 81.6% |
| 4975626 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.54 | 44.0 | 3.55e-01 | 90.4% | 51.7% |
| 4996485 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.54 | 45.0 | 3.23e-01 | 100.0% | 63.6% |
| 3612153 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 40.0 | 2.89e-01 | 80.8% | 71.6% |
| 3755862 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.54 | 45.0 | 4.22e-01 | 97.3% | 92.6% |
| 5014246 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.53 | 35.0 | 3.32e-01 | 75.3% | 52.6% |
| 3283383 | 223.3.1.6 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S13 | 0.53 | 43.0 | 3.40e-01 | 95.9% | 39.9% |
| 3661102 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.53 | 35.0 | 3.95e-01 | 76.7% | 90.9% |
| 3615406 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 45.0 | 4.12e-01 | 97.3% | 94.0% |
| 5061951 | 66.1.1.4 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › FtrD-like | 0.52 | 44.0 | 3.85e-01 | 98.6% | 89.8% |
| 3199715 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.52 | 44.0 | 3.34e-01 | 100.0% | 67.0% |
| 3285336 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.52 | 39.0 | 3.17e-01 | 84.9% | 43.9% |
| 5051418 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.52 | 44.0 | 3.68e-01 | 100.0% | 80.7% |
| 3378706 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.51 | 34.0 | 3.35e-01 | 71.2% | 62.5% |
| 3731400 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 36.0 | 3.05e-01 | 75.3% | 49.6% |
| 4960716 | 244.4.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Complex1_49kDa | 0.51 | 40.0 | 3.91e-01 | 94.5% | 80.0% |
D2
high
residues 86-146
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fqgA02 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.61 | 45.0 | 4.51e-01 | 100.0% | 82.0% |
| 2l1nA00 | 1.10.418.90 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Protein of unknown function DUF1823 | 0.59 | 43.0 | 3.51e-01 | 78.7% | 100.0% |
| 1e7lA02 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.57 | 38.0 | 3.96e-01 | 98.4% | 76.4% |
| 1xqiA00 | 3.30.70.141 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain | 0.57 | 40.0 | 2.94e-01 | 77.0% | 85.7% |
| 4fqgB03 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.55 | 43.0 | 4.27e-01 | 98.4% | 84.8% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 39.0 | 3.17e-01 | 80.3% | 100.0% |
| 3m6jA01 | 1.20.1260.40 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.53 | 40.0 | 3.35e-01 | 86.9% | 87.2% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.52 | 35.0 | 3.22e-01 | 72.1% | 56.2% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.51 | 39.0 | 3.62e-01 | 90.2% | 70.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4992749 | 629.1.1.1 ↗ | alpha bundles › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › Nitrate_red_del | 0.65 | 44.0 | 2.97e-01 | 72.1% | 29.4% |
| 4326655 | 629.1.1.1 ↗ | alpha bundles › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › Nitrate_red_del | 0.64 | 44.0 | 3.07e-01 | 73.8% | 24.2% |
| 3714674 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.61 | 48.0 | 5.00e-01 | 95.1% | 100.0% |
| 4621985 | 4156.1.1.1 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 | 0.57 | 40.0 | 3.02e-01 | 75.4% | 69.7% |
| 5019285 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.56 | 45.0 | 4.04e-01 | 95.1% | 91.6% |
| 3286565 | 2003.1.11.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › AdoHcyase | 0.56 | 46.0 | 2.75e-01 | 93.4% | 70.4% |
| 3993627 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 3.70e-01 | 100.0% | 65.7% |
| 4018838 | 601.1.2.114 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › FIT | 0.54 | 37.0 | 2.67e-01 | 72.1% | 62.1% |
| 3326565 | 130.1.1.42 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › DUF7787 | 0.51 | 34.0 | 3.69e-01 | 90.2% | 97.8% |