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MH445500.1__AWY02854.1__X__00057

Bact-Vir

MH445500.1__AWY02854.1__X__00057

Identity

Accession:
MH445500 ↗
Kingdom:
phage

Quality

94.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alteromonas_phage_JH01

TaxID: 2249314

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-68
PDB
Domain cluster: rep: NC_021798.1__YP_008241627.1__Phi17-2_gp132__00132__D2-64
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 37.0 4.24e-01 100.0% 78.7%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 41.0 4.36e-01 100.0% 75.0%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 41.0 4.13e-01 100.0% 66.2%
1whzA00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.60 35.0 3.53e-01 100.0% 56.5%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 39.0 3.26e-01 100.0% 35.7%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 39.0 4.14e-01 100.0% 82.1%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 37.0 3.90e-01 100.0% 74.6%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 37.0 3.51e-01 100.0% 55.7%
5k19A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 36.0 2.24e-01 100.0% 12.2%
8djfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 48.0 3.14e-01 98.5% 100.0%
1x0tA02 6.20.50.20 Special › Other non-globular › N-terminal domain of TfIIb › 0.53 33.0 3.88e-01 100.0% 95.6%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 29.0 2.95e-01 100.0% 46.4%
4mbrA01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 46.0 3.62e-01 100.0% 66.0%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.52 38.0 3.74e-01 95.5% 73.6%
2w42B02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 40.0 2.89e-01 89.6% 50.2%
2v8qB00 6.20.250.60 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.52 32.0 3.18e-01 83.6% 58.9%
3fvcA03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.51 44.0 3.83e-01 100.0% 90.0%
3wmvB00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 41.0 3.20e-01 89.6% 65.8%
1tj6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.69e-01 100.0% 82.6%
1uswA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 38.0 2.73e-01 88.1% 90.4%
6ctzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 37.0 3.36e-01 79.1% 94.6%
2z4dA00 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.51 42.0 3.84e-01 100.0% 95.8%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3581611 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 38.0 4.29e-01 97.0% 66.0%
5013926 375.8.1.8 ↗ few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › CPxCG_zf 0.70 35.0 4.55e-01 95.5% 91.4%
5039349 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 43.0 4.52e-01 100.0% 71.7%
3965465 375.1.1.130 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_Tnp_IS1 0.67 36.0 4.27e-01 100.0% 77.8%
4031670 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.66 44.0 4.67e-01 100.0% 78.3%
5063004 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 42.0 4.34e-01 100.0% 67.7%
4520767 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.65 43.0 4.26e-01 100.0% 65.7%
3840076 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.63 42.0 4.42e-01 100.0% 76.7%
3165077 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.63 42.0 4.17e-01 100.0% 65.7%
3406803 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 39.0 3.92e-01 100.0% 62.9%
3711659 5.1.4.218 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd 0.59 45.0 2.90e-01 80.6% 98.3%
3888556 220.1.1.48 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Jak1_Phl 0.59 50.0 3.94e-01 100.0% 76.8%
3909317 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.59 37.0 4.13e-01 100.0% 86.0%
3403399 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.57 48.0 4.16e-01 100.0% 83.5%
3791430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 36.0 3.86e-01 100.0% 78.2%
978 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.56 48.0 3.89e-01 100.0% 59.4%
3739945 5.1.4.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.54 40.0 2.49e-01 79.1% 14.7%
4528716 3784.1.1.0 ↗ a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related 0.54 40.0 3.45e-01 100.0% 50.5%
4447285 331.1.1.6 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.54 40.0 4.00e-01 100.0% 78.6%
3245986 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.53 45.0 3.16e-01 97.0% 37.0%
1238059 5.1.5.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 0.52 46.0 2.98e-01 100.0% 99.1%
3935052 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.52 43.0 3.63e-01 100.0% 71.5%
3980339 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 40.0 2.76e-01 89.6% 67.4%
3548499 220.1.1.48 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Jak1_Phl 0.52 45.0 3.54e-01 100.0% 78.7%
3264377 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 46.0 3.80e-01 100.0% 68.3%
3786604 220.1.1.244 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF31261 0.50 44.0 3.62e-01 100.0% 59.2%