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MH450123.1__AXH44420.1__SEA_MARGARETKALI_40__00040
Bact-VirMH450123.1__AXH44420.1__SEA_MARGARETKALI_40__00040
Identity
- Accession:
- MH450123 ↗
- Kingdom:
- phage
Quality
68.2
mean pLDDT
Taxonomy
TaxID: 2250414
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-61
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tiiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.69 | 46.0 | 4.48e-01 | 86.2% | 61.5% |
| 3i7dA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 45.0 | 3.27e-01 | 74.1% | 24.8% |
| 2uwqA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.66 | 46.0 | 4.08e-01 | 75.9% | 50.0% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.65 | 47.0 | 4.04e-01 | 77.6% | 47.4% |
| 2m88A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 45.0 | 3.96e-01 | 72.4% | 94.2% |
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.64 | 58.0 | 5.38e-01 | 100.0% | 95.8% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 42.0 | 3.33e-01 | 74.1% | 37.6% |
| 1ileA02 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.60 | 43.0 | 3.12e-01 | 81.0% | 97.9% |
| 4h87A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.60 | 41.0 | 3.24e-01 | 72.4% | 85.5% |
| 4dohE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 50.0 | 4.34e-01 | 100.0% | 61.2% |
| 2r7kA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.59 | 46.0 | 4.55e-01 | 86.2% | 83.6% |
| 1i5pA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 46.0 | 3.48e-01 | 89.7% | 58.2% |
| 1pqsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 40.0 | 3.72e-01 | 74.1% | 54.5% |
| 1bquA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 47.0 | 4.03e-01 | 100.0% | 58.3% |
| 2dleA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 4.00e-01 | 100.0% | 60.5% |
| 2ic2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 48.0 | 4.07e-01 | 100.0% | 64.4% |
| 3dgcS01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 48.0 | 4.09e-01 | 100.0% | 58.8% |
| 5aj3F00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.56 | 43.0 | 3.45e-01 | 86.2% | 52.8% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.56 | 46.0 | 4.04e-01 | 94.8% | 94.6% |
| 2fqpA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 36.0 | 3.14e-01 | 72.4% | 40.0% |
| 1z5hA03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 38.0 | 3.56e-01 | 100.0% | 57.5% |
| 1m1cA00 | 3.90.1840.10 | Alpha Beta › Alpha-Beta Complex › Major capsid protein › Major capsid protein | 0.55 | 44.0 | 2.57e-01 | 94.8% | 90.5% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.54 | 41.0 | 3.39e-01 | 84.5% | 50.0% |
| 3fysA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 43.0 | 3.32e-01 | 94.8% | 58.8% |
| 5wfiA01 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 37.0 | 3.00e-01 | 74.1% | 45.5% |
| 1ujrA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.53 | 36.0 | 3.31e-01 | 72.4% | 90.4% |
| 6nwmA01 | 2.60.120.280 | Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC | 0.53 | 44.0 | 3.37e-01 | 100.0% | 72.9% |
| 2dt8A01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 42.0 | 3.27e-01 | 94.8% | 62.4% |
| 2j8bA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.53 | 43.0 | 4.04e-01 | 100.0% | 98.7% |
| 6f95A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 39.0 | 2.98e-01 | 84.5% | 85.1% |
| 1sfnA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 39.0 | 2.73e-01 | 91.4% | 71.0% |
| 2okmA00 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 2.77e-01 | 74.1% | 38.4% |
| 2zf8A01 | 2.60.40.2540 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 41.0 | 3.22e-01 | 100.0% | 45.5% |
| 3m5gA02 | 3.90.209.20 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain | 0.51 | 38.0 | 2.71e-01 | 86.2% | 41.3% |
| 2zt5A02 | 3.30.40.230 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.51 | 36.0 | 3.30e-01 | 79.3% | 100.0% |
| 6x5vA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.63e-01 | 100.0% | 63.5% |
| 3fmaA00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.50 | 40.0 | 3.70e-01 | 100.0% | 67.9% |
| 6v93E01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.50 | 40.0 | 2.84e-01 | 91.4% | 52.0% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3389539 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.76 | 54.0 | 5.98e-01 | 84.5% | 95.6% |
| 4934655 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.75 | 57.0 | 5.15e-01 | 82.8% | 96.2% |
| 3404255 | 379.1.1.1 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 | 0.74 | 53.0 | 5.70e-01 | 84.5% | 88.0% |
| 4118694 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.74 | 46.0 | 4.21e-01 | 81.0% | 49.3% |
| 3738248 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.73 | 50.0 | 4.56e-01 | 70.7% | 54.7% |
| 3405569 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.73 | 55.0 | 4.46e-01 | 81.0% | 48.2% |
| 3675525 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 58.0 | 5.50e-01 | 100.0% | 73.5% |
| 3483496 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.72 | 50.0 | 5.52e-01 | 77.6% | 95.6% |
| 4952123 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.72 | 63.0 | 6.28e-01 | 96.6% | 91.7% |
| 3935405 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.72 | 52.0 | 4.49e-01 | 77.6% | 55.6% |
| 4268493 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.71 | 46.0 | 5.08e-01 | 72.4% | 86.7% |
| 3503544 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.70 | 52.0 | 4.22e-01 | 86.2% | 41.8% |
| 3218303 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.70 | 47.0 | 5.08e-01 | 89.7% | 88.9% |
| 3176986 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.70 | 56.0 | 4.93e-01 | 91.4% | 60.0% |
| 5059796 | 4326.1.1.0 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like | 0.70 | 59.0 | 5.64e-01 | 100.0% | 79.7% |
| 4118693 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.70 | 46.0 | 4.26e-01 | 86.2% | 53.3% |
| 3575366 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.69 | 52.0 | 4.44e-01 | 81.0% | 52.6% |
| 4062740 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.69 | 56.0 | 4.18e-01 | 89.7% | 92.4% |
| 3535929 | 386.1.1.248 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_ZNF592 | 0.69 | 50.0 | 3.58e-01 | 77.6% | 29.1% |
| 3412052 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.69 | 50.0 | 4.97e-01 | 86.2% | 75.0% |
| 3572295 | 386.1.1.257 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_Z280C_D | 0.69 | 45.0 | 5.00e-01 | 74.1% | 100.0% |
| 3993535 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.68 | 47.0 | 4.29e-01 | 75.9% | 53.8% |
| 3859590 | 386.1.1.248 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_ZNF592 | 0.68 | 49.0 | 5.17e-01 | 77.6% | 98.0% |
| 5023092 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.67 | 59.0 | 4.30e-01 | 94.8% | 93.2% |
| 3781851 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.67 | 48.0 | 3.11e-01 | 77.6% | 18.0% |
| 3213903 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 49.0 | 4.21e-01 | 81.0% | 50.5% |
| 5042324 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.66 | 45.0 | 3.95e-01 | 72.4% | 48.9% |
| 3801584 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.65 | 54.0 | 4.57e-01 | 100.0% | 54.0% |
| 4534735 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.65 | 54.0 | 3.97e-01 | 93.1% | 88.4% |
| 3535768 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.65 | 50.0 | 4.21e-01 | 91.4% | 49.0% |
| 169110 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.63 | 57.0 | 5.37e-01 | 100.0% | 95.7% |
| 4134159 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.63 | 46.0 | 3.36e-01 | 87.9% | 25.9% |
| 3534502 | 109.4.1.1310 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRIP12_N | 0.62 | 45.0 | 2.55e-01 | 82.8% | 6.1% |
| 3798117 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.62 | 42.0 | 3.58e-01 | 72.4% | 99.0% |
| 3738773 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.62 | 45.0 | 4.66e-01 | 94.8% | 85.5% |
| 5048876 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.61 | 51.0 | 5.00e-01 | 100.0% | 95.4% |
| 3183075 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 43.0 | 3.81e-01 | 77.6% | 50.5% |
| 3754085 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.61 | 44.0 | 3.77e-01 | 81.0% | 46.2% |
| 4188115 | 109.4.1.1310 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRIP12_N | 0.59 | 39.0 | 2.20e-01 | 70.7% | 4.9% |
| 4968660 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.59 | 42.0 | 3.36e-01 | 75.9% | 82.5% |
| 3970277 | 376.1.1.134 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › NosL | 0.59 | 48.0 | 4.58e-01 | 100.0% | 77.3% |
| 5061435 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.58 | 45.0 | 3.96e-01 | 100.0% | 54.7% |
| 3229807 | 822.1.1.0 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain | 0.58 | 48.0 | 4.39e-01 | 100.0% | 70.0% |
| 3390573 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.58 | 44.0 | 4.41e-01 | 84.5% | 86.4% |
| None | — | 0.58 | 50.0 | 2.86e-01 | 100.0% | 9.5% | |
| 3988217 | 241.12.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like | 0.57 | 41.0 | 2.94e-01 | 77.6% | 22.5% |
| 4024700 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.57 | 42.0 | 2.60e-01 | 82.8% | 33.9% |
| 4340143 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.57 | 48.0 | 4.60e-01 | 98.3% | 98.6% |
| 3894555 | 6108.1.1.0 ↗ | alpha bundles › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins | 0.57 | 49.0 | 2.80e-01 | 100.0% | 9.6% |
| 3351227 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 48.0 | 2.99e-01 | 100.0% | 16.6% |
| 3560523 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.56 | 47.0 | 3.96e-01 | 100.0% | 61.9% |
| 3377897 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 47.0 | 2.76e-01 | 100.0% | 10.5% |
| None | — | 0.55 | 47.0 | 2.73e-01 | 100.0% | 9.6% | |
| 3924848 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.55 | 39.0 | 3.75e-01 | 100.0% | 62.7% |
| 1401773 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 47.0 | 3.00e-01 | 100.0% | 19.5% |
| 3250510 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 3.70e-01 | 100.0% | 48.7% |
| 3650185 | 221.1.1.166 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26130 | 0.55 | 38.0 | 3.46e-01 | 86.2% | 51.8% |
| 4981878 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 38.0 | 3.60e-01 | 81.0% | 61.4% |
| 3969157 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.52 | 42.0 | 3.13e-01 | 94.8% | 56.5% |
| 4024428 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.50 | 42.0 | 2.77e-01 | 100.0% | 47.4% |
| 3928608 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.50 | 35.0 | 2.91e-01 | 75.9% | 38.3% |