←Back to structures
MH460459.1__AXG66397.1__JA10_044__00044
Bact-VirMH460459.1__AXG66397.1__JA10_044__00044
Identity
- Accession:
- MH460459 ↗
- Kingdom:
- phage
Quality
91.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autotranscriptaviridae›
Ningirsuvirus›
Dickeya_phage_vB_DsoP_JA10
TaxID: 2283033
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-103
Domain cluster:
rep: MT920315.1__QOI66464.1__X__00088__D2-96
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bb3A02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.66 | 36.0 | 3.79e-01 | 74.3% | 58.4% |
| 2zvbA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.59 | 45.0 | 4.14e-01 | 97.0% | 62.5% |
| 3m70A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 35.0 | 3.44e-01 | 76.2% | 56.6% |
| 3kl0D01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 36.0 | 3.58e-01 | 74.3% | 62.3% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 40.0 | 4.05e-01 | 73.3% | 85.7% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 36.0 | 3.67e-01 | 75.2% | 99.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3980120 | 7079.1.1.1 ↗ | a+b complex topology › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Caudo_TAP | 0.80 | 75.0 | 6.79e-01 | 100.0% | 86.2% |
| 2526303 | 7079.1.1.1 ↗ | a+b complex topology › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Caudo_TAP | 0.77 | 72.0 | 7.20e-01 | 100.0% | 98.1% |
| 3980843 | 7079.1.1.1 ↗ | a+b complex topology › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Caudo_TAP | 0.77 | 70.0 | 7.08e-01 | 98.0% | 98.0% |
| 3998042 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 39.0 | 3.87e-01 | 75.2% | 87.6% |
| 3900729 | 221.1.1.176 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26749 | 0.52 | 36.0 | 4.03e-01 | 73.3% | 91.3% |