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MH460461.1__AXG66751.1__JA29_025__00025

Bact-Vir

MH460461.1__AXG66751.1__JA29_025__00025

Identity

Accession:
MH460461 ↗
Kingdom:
phage

Quality

89.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmondvirus› Dickeya_phage_vB_DsoM_JA29

TaxID: 2283031

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-75
PDB
Domain cluster: representative
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5015648 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.79 55.0 3.93e-01 74.7% 26.3%
4985883 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.79 52.0 3.66e-01 74.7% 23.8%
4938917 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.76 54.0 3.75e-01 74.7% 24.1%
5068964 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.73 52.0 3.43e-01 74.7% 20.1%
4946158 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.58 42.0 3.04e-01 74.7% 87.7%
4014394 1017.1.1.0 ↗ a+b two layers › Rrs1 › Rrs1 › Rrs1 0.53 35.0 3.47e-01 74.7% 62.5%
3684912 1017.1.1.1 ↗ a+b two layers › Rrs1 › Rrs1 › Rrs1 › RRS1 0.53 34.0 3.38e-01 74.7% 61.3%
5052532 5063.1.1.0 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK 0.52 37.0 3.46e-01 72.0% 88.9%
D2 medium residues 76-125_177-254
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00303.25 best Thymidylat_synt 96.9 1.60e-27 98.4% 43.8%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bkpA00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.85 79.0 5.84e-01 100.0% 43.9%
3v8hC00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.82 79.0 5.84e-01 100.0% 58.3%
1tisA00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.82 80.0 5.85e-01 100.0% 45.5%
3egyX00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.81 56.0 4.41e-01 100.0% 38.5%
1bo7A00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.81 78.0 5.57e-01 100.0% 53.8%
1b5eA00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.70 65.0 5.17e-01 100.0% 68.9%
8igrI01 2.40.270.10 Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 0.59 33.0 2.95e-01 96.1% 38.1%
2a6hC06 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.56 31.0 3.09e-01 93.0% 49.6%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944795 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.93 89.0 6.21e-01 100.0% 57.7%
3961326 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.88 81.0 6.91e-01 100.0% 64.9%
4664958 266.1.1.0 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase 0.88 80.0 6.05e-01 100.0% 45.5%
4599962 266.1.1.0 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase 0.86 77.0 5.79e-01 100.0% 43.0%
3203076 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.85 82.0 5.81e-01 100.0% 49.2%
1900468 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.85 78.0 5.81e-01 100.0% 43.7%
5059575 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.83 80.0 5.91e-01 100.0% 44.1%
3164619 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.83 80.0 5.93e-01 100.0% 46.6%
4228846 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.83 80.0 5.67e-01 100.0% 52.0%
4151800 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.82 80.0 5.77e-01 100.0% 52.0%
3479792 266.1.1.0 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase 0.82 80.0 5.72e-01 100.0% 45.2%
2540892 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.82 79.0 5.59e-01 100.0% 42.9%
4086625 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.81 77.0 5.72e-01 100.0% 44.6%
4225236 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.81 78.0 5.79e-01 100.0% 45.6%
4937005 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.81 78.0 5.49e-01 100.0% 45.1%
4108234 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.81 78.0 5.55e-01 100.0% 54.4%
5022688 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.81 60.0 5.06e-01 100.0% 49.2%
4582423 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.80 59.0 4.82e-01 100.0% 44.5%
4954631 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.79 58.0 4.67e-01 100.0% 42.2%
5046158 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.78 59.0 5.01e-01 100.0% 50.0%
5015648 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.76 59.0 4.92e-01 100.0% 50.2%
4932636 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.74 59.0 4.90e-01 100.0% 49.8%
4985883 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.74 56.0 4.64e-01 100.0% 47.6%
4949404 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.73 59.0 4.74e-01 100.0% 46.5%
4976145 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.68 59.0 4.79e-01 100.0% 51.6%
5068964 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.68 63.0 4.78e-01 100.0% 46.7%
5050802 266.1.1.1 ↗ a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt 0.63 59.0 4.46e-01 100.0% 50.5%
4096132 5104.1.1.1 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.51 27.0 2.84e-01 90.6% 53.0%
D3 medium residues 126-176
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.69 52.0 4.55e-01 100.0% 56.2%
1kafA00 3.90.1150.20 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain 0.69 47.0 3.72e-01 100.0% 34.3%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 49.0 4.13e-01 100.0% 48.2%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 4.59e-01 100.0% 60.0%
2wk1A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 47.0 3.10e-01 84.3% 97.5%
8be0A01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.63 44.0 2.97e-01 74.5% 99.5%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 3.80e-01 94.1% 77.5%
4qpkB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.60 47.0 3.67e-01 96.1% 70.1%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.60 42.0 3.13e-01 72.5% 56.2%
4qjvA03 3.30.70.3110 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 42.0 4.06e-01 100.0% 64.5%
5a72A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.59 45.0 3.24e-01 100.0% 28.0%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 50.0 4.17e-01 100.0% 59.1%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 3.99e-01 100.0% 61.0%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.58 41.0 2.91e-01 74.5% 56.7%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.58 43.0 3.84e-01 100.0% 55.4%
2e9yB00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.57 44.0 2.84e-01 92.2% 98.4%
7npaA02 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 45.0 3.88e-01 100.0% 54.1%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.18e-01 98.0% 66.2%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 3.75e-01 100.0% 50.9%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 3.73e-01 100.0% 53.6%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 3.51e-01 100.0% 42.1%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 4.10e-01 98.0% 64.1%
4c9yA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.56 46.0 3.48e-01 92.2% 65.0%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 3.83e-01 100.0% 57.4%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.01e-01 100.0% 72.2%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 3.80e-01 100.0% 60.8%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 45.0 3.80e-01 100.0% 52.8%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 3.88e-01 100.0% 66.3%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.55 45.0 4.20e-01 100.0% 74.3%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 3.58e-01 100.0% 47.0%
1i27A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.08e-01 96.1% 78.1%
3l4gB03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.54 47.0 4.13e-01 100.0% 66.2%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.26e-01 98.0% 82.8%
2ab5A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 38.0 2.98e-01 100.0% 30.6%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 39.0 3.16e-01 100.0% 37.8%
5idmA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 42.0 3.12e-01 100.0% 39.5%
2d9iA00 3.30.1370.110 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.53 43.0 3.69e-01 100.0% 65.6%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 4.23e-01 98.0% 88.9%
2gqcA01 3.30.70.2080 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 42.0 4.18e-01 100.0% 85.7%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.56e-01 100.0% 58.1%
6u9hF02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.53 39.0 3.59e-01 100.0% 58.4%
1p65A00 6.10.140.90 Special › Helix non-globular › Helix Hairpins › 0.53 40.0 3.88e-01 86.3% 71.9%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.53 43.0 3.77e-01 100.0% 59.7%
2jheA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 41.0 3.56e-01 100.0% 55.6%
3obfA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 38.0 2.77e-01 84.3% 54.5%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.51e-01 100.0% 61.4%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.96e-01 98.0% 81.2%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 3.93e-01 100.0% 77.3%
2zzzA02 3.30.63.10 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain 0.51 44.0 4.22e-01 100.0% 90.0%
2i2cA01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.51 44.0 3.34e-01 100.0% 73.6%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.58e-01 98.0% 65.1%
4amwA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.50 44.0 2.74e-01 100.0% 77.4%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 41.0 3.51e-01 100.0% 54.3%
4dezA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.50 44.0 3.56e-01 100.0% 53.5%
3cuqC01 1.10.10.570 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" 0.50 40.0 3.44e-01 100.0% 56.1%
1dctA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 39.0 2.86e-01 94.1% 49.1%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5010185 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.68 50.0 4.56e-01 100.0% 58.6%
5009701 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.66 49.0 4.51e-01 100.0% 60.0%
5028861 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 51.0 5.06e-01 100.0% 89.1%
2831815 101.1.2.47 ↗ alpha arrays › HTH › HTH › winged helix domain › S10_plectin 0.62 52.0 4.56e-01 100.0% 66.7%
3815874 101.1.2.245 ↗ alpha arrays › HTH › HTH › winged helix domain › PORR 0.61 41.0 2.80e-01 72.5% 41.4%
3613269 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.60 48.0 3.00e-01 100.0% 16.5%
4022855 304.117.1.5 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › PF28298 0.60 52.0 4.43e-01 100.0% 67.1%
3309668 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.60 41.0 3.28e-01 70.6% 70.5%
5028329 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 51.0 4.54e-01 98.0% 77.3%
3168448 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.59 49.0 3.76e-01 100.0% 47.3%
3799214 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 42.0 3.26e-01 74.5% 71.3%
4972865 101.1.2.896 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.58 49.0 3.88e-01 100.0% 53.1%
3657579 101.1.2.267 ↗ alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.58 47.0 4.40e-01 100.0% 75.7%
4269299 328.6.1.1 ↗ a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.57 47.0 3.24e-01 100.0% 24.4%
3971474 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.57 45.0 3.28e-01 86.3% 60.0%
3762392 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.57 50.0 3.25e-01 100.0% 34.7%
3301908 101.1.2.281 ↗ alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.57 47.0 3.97e-01 100.0% 63.2%
5077205 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 45.0 3.90e-01 100.0% 74.7%
3781962 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.56 46.0 4.36e-01 98.0% 83.1%
4326472 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 45.0 4.31e-01 98.0% 80.0%
3928777 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.56 46.0 3.70e-01 100.0% 55.5%
3505845 101.1.2.407 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.55 45.0 3.79e-01 100.0% 67.0%
4937110 101.1.2.128 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.55 45.0 4.11e-01 98.0% 70.7%
3481546 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 46.0 4.34e-01 100.0% 84.6%
5078802 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 4.18e-01 100.0% 84.3%
3685473 109.4.1.295 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COP9_hel_rpt 0.55 45.0 2.58e-01 88.2% 38.5%
4489949 304.28.1.7 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › tRNA_synt_2f 0.55 38.0 2.57e-01 74.5% 60.4%
4228350 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.55 39.0 3.69e-01 100.0% 61.5%
3739571 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.55 38.0 3.50e-01 74.5% 100.0%
3487912 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 3.64e-01 100.0% 70.0%
4972208 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.55 47.0 3.94e-01 98.0% 66.7%
3494198 328.7.1.0 ↗ a+b two layers › IF3-like › Smr domain › Smr domain 0.54 45.0 3.14e-01 98.0% 26.8%
5046509 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 4.00e-01 100.0% 70.7%
148155 304.37.1.1 ↗ a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr 0.54 42.0 3.12e-01 100.0% 29.9%
4933315 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 3.88e-01 98.0% 68.8%
3362835 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.54 45.0 4.04e-01 100.0% 67.1%
4021477 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 46.0 3.96e-01 100.0% 78.8%
3273469 101.1.2.281 ↗ alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.53 45.0 3.95e-01 100.0% 74.7%
5029842 101.1.2.645 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.53 43.0 3.60e-01 100.0% 61.0%
5043893 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.53 44.0 4.09e-01 100.0% 85.7%
3997898 101.1.2.407 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.53 45.0 3.55e-01 100.0% 57.4%
3577491 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.53 44.0 3.42e-01 90.2% 98.1%
3315108 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.53 43.0 3.51e-01 100.0% 57.3%
5042101 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.53 40.0 3.70e-01 100.0% 62.9%
3680635 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.52 42.0 3.51e-01 100.0% 59.0%
3989612 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 4.19e-01 98.0% 91.7%
3383404 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.52 42.0 3.51e-01 100.0% 59.6%
3685642 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.52 41.0 3.56e-01 98.0% 55.0%
4529810 304.20.1.5 ↗ a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f 0.52 43.0 2.90e-01 100.0% 22.2%
4217857 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 4.10e-01 100.0% 89.2%
4995085 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 3.65e-01 100.0% 68.4%
5080071 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 45.0 3.70e-01 100.0% 77.9%
3304324 101.1.2.106 ↗ alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 0.52 42.0 3.26e-01 100.0% 56.3%
3210600 327.11.2.41 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF26657 0.52 45.0 4.12e-01 100.0% 74.3%
3467284 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.52 41.0 3.42e-01 100.0% 51.9%
4943074 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.52 40.0 3.04e-01 96.1% 42.0%
4024063 101.1.2.28 ↗ alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.51 42.0 3.46e-01 98.0% 49.5%
3165321 101.1.2.280 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.51 42.0 3.64e-01 100.0% 62.2%
4339487 304.55.2.7 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › tRNA_synt_2f 0.51 42.0 2.86e-01 100.0% 22.7%
4276676 101.1.2.280 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.51 42.0 3.83e-01 98.0% 74.7%
5030244 2003.1.5.60 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FmrO 0.51 42.0 2.96e-01 96.1% 28.2%
3603379 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.68e-01 100.0% 68.8%
4025269 310.1.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain 0.51 44.0 3.35e-01 100.0% 60.0%
4211027 304.20.1.5 ↗ a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f 0.51 42.0 2.84e-01 100.0% 22.7%
4946714 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.50 43.0 3.65e-01 100.0% 71.1%
3744213 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.50 40.0 3.09e-01 98.0% 42.9%