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MH460461.1__AXG66928.1__JA29_202__00202

Bact-Vir

MH460461.1__AXG66928.1__JA29_202__00202

Identity

Accession:
MH460461 ↗
Kingdom:
phage

Quality

85.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmondvirus› Dickeya_phage_vB_DsoM_JA29

TaxID: 2283031

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-143
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.66 40.0 4.73e-01 81.7% 89.7%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 41.0 4.96e-01 96.2% 100.0%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 40.0 4.42e-01 82.4% 76.2%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 41.0 4.54e-01 83.2% 80.2%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 40.0 4.52e-01 97.7% 84.0%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 39.0 4.39e-01 84.7% 83.5%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 4.67e-01 100.0% 84.2%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 37.0 3.95e-01 86.3% 70.2%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 36.0 4.26e-01 80.2% 89.9%
3gkuA03 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.58 32.0 4.05e-01 76.3% 97.2%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 4.14e-01 89.3% 73.6%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 38.0 4.23e-01 87.8% 84.5%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.55 32.0 3.62e-01 78.6% 76.6%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.55 34.0 4.09e-01 83.2% 100.0%
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 35.0 3.98e-01 84.0% 91.4%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.54 28.0 3.52e-01 71.0% 86.3%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 33.0 3.91e-01 90.1% 89.0%
3i3wA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.54 28.0 3.42e-01 100.0% 80.5%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.54 29.0 3.15e-01 75.6% 59.5%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 25.0 3.16e-01 97.7% 74.3%
4qjvB00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.53 28.0 3.18e-01 71.0% 68.1%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 34.0 3.89e-01 90.1% 91.6%
4if8B01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.52 41.0 3.31e-01 84.7% 92.2%
2if1A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.52 27.0 2.82e-01 71.8% 50.0%
4k59A00 2.60.40.4380 Mainly Beta › Sandwich › Immunoglobulin-like › Translational regulator CsrA 0.51 24.0 3.04e-01 90.1% 77.3%
4oj3B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 26.0 2.99e-01 87.8% 65.3%
6lpnA04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 26.0 3.03e-01 100.0% 66.3%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 26.0 3.06e-01 99.2% 71.8%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4978419 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.69 39.0 4.92e-01 90.1% 96.0%
4979815 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.67 41.0 4.88e-01 92.4% 88.9%
5067344 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 44.0 4.91e-01 100.0% 86.0%
5068497 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.66 45.0 4.76e-01 99.2% 78.0%
2494143 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 42.0 4.51e-01 82.4% 75.7%
5082386 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 43.0 4.47e-01 84.0% 71.8%
5010819 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 38.0 3.65e-01 89.3% 51.3%
3969012 101.1.2.485 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF2513 0.63 37.0 4.41e-01 84.7% 85.6%
4971686 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 40.0 4.39e-01 82.4% 80.0%
3587826 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 40.0 4.40e-01 82.4% 79.6%
5047402 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 42.0 4.52e-01 84.0% 81.8%
4109840 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 43.0 4.86e-01 94.7% 94.0%
4373647 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.62 43.0 4.53e-01 94.7% 78.3%
5011620 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 38.0 4.49e-01 100.0% 90.0%
5010185 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.61 31.0 3.97e-01 76.3% 87.1%
5062630 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 36.0 4.39e-01 91.6% 93.8%
5026783 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.61 42.0 4.73e-01 94.7% 92.0%
3706721 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 36.0 4.41e-01 88.5% 100.0%
4284507 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.60 42.0 4.64e-01 88.5% 88.6%
5044892 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 40.0 4.27e-01 84.7% 76.5%
5023661 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.60 41.0 4.19e-01 98.5% 71.3%
3465836 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 40.0 4.49e-01 94.7% 90.0%
5056655 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 34.0 4.19e-01 91.6% 92.5%
5077022 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.59 39.0 4.40e-01 84.7% 89.0%
3360854 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.58 41.0 4.31e-01 89.3% 79.2%
4999898 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.58 35.0 4.04e-01 89.3% 86.7%
5000349 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.57 40.0 4.21e-01 96.9% 79.2%
4974161 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.57 40.0 4.16e-01 94.7% 76.6%
5010188 328.5.1.0 ↗ a+b two layers › IF3-like › SirA-like › SirA-like 0.57 30.0 3.73e-01 78.6% 88.6%
3743748 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 36.0 4.24e-01 77.1% 93.3%
3935624 304.120.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.56 33.0 3.41e-01 90.8% 58.4%
5075416 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.56 36.0 3.88e-01 91.6% 76.4%
3332006 101.1.2.245 ↗ alpha arrays › HTH › HTH › winged helix domain › PORR 0.55 37.0 3.84e-01 83.2% 72.5%
3651874 306.3.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.55 29.0 3.28e-01 71.8% 64.0%
5620 320.3.1.1 ↗ a+b two layers › R3H domain-like › PG1857-like › PG1857-like › DUF2023 0.54 29.0 3.15e-01 75.6% 59.5%
3641694 306.3.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.54 28.0 3.09e-01 71.0% 59.0%
3386835 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 49.0 4.60e-01 100.0% 92.5%
4439773 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.53 26.0 3.12e-01 90.1% 67.1%
2879783 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.53 25.0 3.14e-01 100.0% 74.7%
5078768 101.1.2.819 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27231 0.52 41.0 3.83e-01 90.1% 67.5%
5064968 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 38.0 3.84e-01 90.1% 75.4%
2989745 11.1.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.52 30.0 3.23e-01 77.1% 64.6%
4416349 304.162.1.1 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.52 26.0 3.18e-01 96.9% 73.8%
4944813 101.1.2.819 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27231 0.51 43.0 3.90e-01 92.4% 65.9%
3885537 327.16.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.51 25.0 3.16e-01 80.2% 78.7%
3476902 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 31.0 3.02e-01 96.9% 52.4%
D2 high residues 151-295
PDB
Domain cluster: rep: MH460463.1__AXG67258.1__AD1_214__00214__D1-142
D3 medium residues 312-331_446-529
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6xzqA01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.52 38.0 3.33e-01 76.9% 92.6%
5xuhA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.52 42.0 3.99e-01 88.5% 96.8%
2bddA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.51 42.0 3.97e-01 90.4% 94.5%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3706910 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.75 69.0 5.49e-01 100.0% 80.5%
3964178 324.1.1.1 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.60 43.0 4.02e-01 76.9% 97.0%
3939076 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.57 31.0 3.24e-01 70.2% 56.0%
3914941 2484.1.1.145 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 0.53 37.0 2.65e-01 71.2% 41.3%
3251654 2.9.1.1 ↗ beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB 0.52 44.0 3.01e-01 92.3% 77.0%
3562058 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 28.0 2.71e-01 76.0% 43.2%
4890753 4342.1.1.2 ↗ alpha complex topology › Tex N-terminal region-like › Tex N-terminal region-like › Tex N-terminal region-like › YqgF 0.51 39.0 3.12e-01 81.7% 70.1%
D4 medium residues 332-445
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ktmA00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.74 43.0 5.33e-01 83.3% 95.6%
1b10A00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.70 41.0 4.29e-01 78.1% 62.5%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.70 43.0 4.47e-01 85.1% 64.8%
1w0bA01 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.70 40.0 4.43e-01 94.7% 69.6%
3da1A03 1.10.8.870 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Alpha-glycerophosphate oxidase, cap domain 0.68 40.0 3.78e-01 86.0% 48.5%
4m70B00 1.10.246.200 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain 0.65 37.0 4.09e-01 86.8% 70.3%
4q5nA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.63 37.0 3.81e-01 96.5% 59.8%
1yq3C02 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.60 39.0 4.04e-01 79.8% 68.5%
5xtck00 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 34.0 3.69e-01 87.7% 64.9%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 40.0 4.57e-01 84.2% 95.1%
3h36A00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.59 37.0 4.21e-01 82.5% 89.7%
5mmjo00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.59 30.0 3.69e-01 86.0% 76.0%
4h33A00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 37.0 4.11e-01 100.0% 80.2%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.58 42.0 4.26e-01 97.4% 75.9%
3dptB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 35.0 4.37e-01 81.6% 100.0%
8ex5A02 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.57 50.0 4.09e-01 98.2% 93.7%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.57 37.0 4.30e-01 94.7% 93.8%
2hh7A00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.57 35.0 4.05e-01 88.6% 83.5%
4m52A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 43.0 3.46e-01 78.9% 55.9%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.56 31.0 3.54e-01 92.1% 71.3%
2xv9A00 1.10.533.30 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Nematode polyprotein allergen ABA-1 0.56 35.0 3.40e-01 93.0% 53.7%
4ysxC00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.55 41.0 3.73e-01 78.1% 64.1%
3u9jA00 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.55 38.0 3.46e-01 71.9% 89.2%
1u61A00 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.54 34.0 3.30e-01 75.4% 55.9%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 35.0 3.18e-01 100.0% 47.2%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 32.0 3.39e-01 92.1% 68.0%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.52 34.0 4.07e-01 95.6% 98.7%
1vs5O00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.51 30.0 3.35e-01 89.5% 73.9%
3nbxX03 1.20.58.1510 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 32.0 3.44e-01 90.4% 71.3%
1a52A00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.50 44.0 3.50e-01 97.4% 58.6%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3794529 148.1.3.193 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TRAP-gamma 0.72 51.0 4.53e-01 71.9% 64.5%
3419760 150.7.1.3 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE › CGLD27-like 0.71 51.0 5.81e-01 93.9% 100.0%
4964387 5058.1.1.0 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.68 42.0 4.52e-01 93.0% 71.0%
3270180 5063.1.1.0 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK 0.66 44.0 4.90e-01 77.2% 85.6%
4564044 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.63 40.0 3.04e-01 93.0% 27.7%
3633527 3755.1.1.0 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.63 45.0 4.21e-01 74.6% 63.6%
5012522 5058.1.1.2 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st 0.62 38.0 4.17e-01 94.7% 76.7%
3799055 188.1.1.1 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.61 52.0 3.86e-01 93.0% 63.7%
4939310 5045.1.1.3 ↗ alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › V_ATPase_I 0.60 53.0 3.83e-01 97.4% 69.7%
3940867 632.22.1.67 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › DUF842 0.58 37.0 3.98e-01 74.6% 76.8%
4667952 616.1.1.0 ↗ alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.56 30.0 3.57e-01 86.0% 75.0%
5077213 1075.1.2.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.56 46.0 4.00e-01 88.6% 67.4%
5045723 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.56 47.0 3.91e-01 92.1% 95.6%
3961527 601.1.2.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.56 43.0 4.02e-01 82.5% 100.0%
3636524 192.4.1.13 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Cactin_mid 0.56 42.0 3.49e-01 79.8% 79.0%
4932476 1079.1.1.0 ↗ alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA 0.55 42.0 3.46e-01 80.7% 75.7%
3869297 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.55 47.0 3.80e-01 94.7% 88.0%
3368923 7064.1.1.1 ↗ alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 0.54 46.0 3.99e-01 93.0% 83.9%
3816176 5041.1.1.0 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.54 45.0 4.67e-01 89.5% 99.0%
3356616 632.22.1.67 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › DUF842 0.54 36.0 3.79e-01 77.2% 77.0%
5010597 5058.1.1.99 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › DUF373 0.54 37.0 3.53e-01 71.9% 83.6%
3597341 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.53 46.0 3.25e-01 93.9% 98.6%
3240455 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.53 32.0 3.56e-01 96.5% 75.6%
3967621 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.53 42.0 3.63e-01 86.8% 96.2%
3505833 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.52 42.0 3.61e-01 86.0% 97.8%
3247632 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.52 43.0 3.71e-01 92.1% 100.0%
3893641 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.52 43.0 3.45e-01 89.5% 83.5%
3292475 5001.1.1.32 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Solute_trans_a 0.52 45.0 3.47e-01 99.1% 80.4%
3622548 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.52 41.0 3.47e-01 87.7% 93.7%
3184169 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.51 45.0 3.71e-01 98.2% 92.6%
4590424 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.51 43.0 3.65e-01 93.9% 96.5%
5059337 101.1.2.21 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.51 30.0 2.85e-01 86.8% 46.4%
5034431 101.1.2.21 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.51 30.0 2.81e-01 82.5% 45.7%
3973430 5050.1.1.1 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.50 42.0 3.63e-01 91.2% 100.0%
3743077 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.50 36.0 3.56e-01 100.0% 68.8%