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MH487649.1__AXU41194.1__BC01_097__00097
Bact-VirMH487649.1__AXU41194.1__BC01_097__00097
Identity
- Accession:
- MH487649 ↗
- Kingdom:
- phage
Quality
80.0
mean pLDDT
Taxonomy
TaxID: 2039884
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-83
Domain cluster:
rep: MH487649.1__AXU41193.1__BC01_096__00096__D3-58
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jz6A01 | 2.30.170.40 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 | 0.63 | 30.0 | 3.48e-01 | 98.6% | 60.0% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 44.0 | 4.40e-01 | 81.2% | 94.4% |
| 3sm3A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 44.0 | 3.19e-01 | 82.6% | 40.6% |
| 1vwxg01 | 6.20.370.70 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.58 | 30.0 | 3.68e-01 | 84.1% | 86.5% |
| 1vs3A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.54 | 44.0 | 3.55e-01 | 92.8% | 81.9% |
| 1fs7A01 | 1.10.1130.10 | Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A | 0.53 | 43.0 | 2.77e-01 | 88.4% | 42.2% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 37.0 | 3.18e-01 | 91.3% | 42.9% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 42.0 | 3.52e-01 | 92.8% | 74.2% |
| 8affD01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.50 | 40.0 | 3.92e-01 | 94.2% | 82.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4604143 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 46.0 | 3.29e-01 | 92.8% | 24.9% |
| 3371937 | 256.1.1.8 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Helitron_like_N | 0.59 | 44.0 | 4.29e-01 | 82.6% | 93.8% |
| 3657462 | 306.7.1.3 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Helitron_like_N | 0.58 | 45.0 | 4.09e-01 | 85.5% | 84.2% |
| 4865694 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.58 | 40.0 | 3.77e-01 | 87.0% | 59.0% |
| 5039316 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.56 | 44.0 | 3.23e-01 | 91.3% | 86.9% |
| 4538747 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.55 | 40.0 | 4.23e-01 | 92.8% | 98.2% |
| 4021130 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.55 | 41.0 | 3.06e-01 | 84.1% | 69.0% |
| 3166912 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 45.0 | 3.38e-01 | 94.2% | 35.8% |
| 4982133 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.54 | 38.0 | 3.73e-01 | 92.8% | 66.3% |
| 164474 | 387.1.1.8 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › Omega-toxin | 0.54 | 31.0 | 3.83e-01 | 82.6% | 100.0% |
| 3214689 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.52 | 35.0 | 3.28e-01 | 85.5% | 53.3% |
| 5043504 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 34.0 | 3.66e-01 | 95.7% | 90.0% |
| 3684154 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.52 | 38.0 | 3.69e-01 | 82.6% | 78.8% |
| 4189243 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.51 | 42.0 | 3.45e-01 | 91.3% | 63.8% |
| 4016567 | 304.61.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aldoxime dehydratase › Aldoxime dehydratase › Dehydratase_hem | 0.51 | 41.0 | 3.82e-01 | 94.2% | 75.8% |
| 5053097 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.51 | 40.0 | 3.71e-01 | 91.3% | 70.5% |
| 3504233 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.50 | 41.0 | 3.63e-01 | 89.9% | 70.0% |
| 4561249 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.50 | 34.0 | 2.96e-01 | 72.5% | 50.8% |