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MH494197.1__AXC38785.1__X__00073
Bact-VirMH494197.1__AXC38785.1__X__00073
Identity
- Accession:
- MH494197 ↗
- Kingdom:
- phage
Quality
71.2
mean pLDDT
Taxonomy
TaxID: 2267248
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-195
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.68 | 32.0 | 4.47e-01 | 87.0% | 92.0% |
| 6htnA01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.66 | 45.0 | 5.20e-01 | 84.9% | 94.2% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.58 | 26.0 | 3.91e-01 | 75.7% | 100.0% |
| 2kxgA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 29.0 | 3.85e-01 | 88.6% | 90.5% |
| 3lf7A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 52.0 | 4.01e-01 | 100.0% | 69.0% |
| 2g8sB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.57 | 50.0 | 4.05e-01 | 94.6% | 60.2% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 49.0 | 3.72e-01 | 96.2% | 62.7% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.55 | 28.0 | 3.51e-01 | 79.5% | 80.4% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 48.0 | 3.98e-01 | 96.2% | 58.3% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 27.0 | 3.41e-01 | 75.1% | 79.4% |
| 1wnhA02 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 31.0 | 3.66e-01 | 91.4% | 85.8% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 27.0 | 3.60e-01 | 76.2% | 93.7% |
| 1ar0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 34.0 | 3.98e-01 | 88.1% | 98.4% |
| 3bb9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 34.0 | 4.00e-01 | 89.7% | 100.0% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3188943 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.64 | 54.0 | 4.14e-01 | 88.1% | 62.0% |
| 4022907 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 33.0 | 4.37e-01 | 87.6% | 95.0% |
| 3205088 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 34.0 | 4.18e-01 | 87.6% | 83.3% |
| 3265309 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.61 | 31.0 | 3.56e-01 | 83.8% | 63.9% |
| 3484000 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 54.0 | 3.29e-01 | 96.2% | 33.3% |
| 4386721 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.61 | 35.0 | 4.29e-01 | 86.5% | 89.6% |
| 3448058 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.60 | 53.0 | 4.35e-01 | 96.2% | 87.8% |
| 3343255 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.59 | 55.0 | 4.00e-01 | 100.0% | 64.5% |
| 3611540 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 54.0 | 4.13e-01 | 100.0% | 77.7% |
| 4890224 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.59 | 54.0 | 3.90e-01 | 100.0% | 58.7% |
| 3425790 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.58 | 31.0 | 4.17e-01 | 87.0% | 100.0% |
| 3784394 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 48.0 | 3.59e-01 | 88.6% | 50.1% |
| 3409624 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.57 | 52.0 | 3.90e-01 | 98.9% | 82.2% |
| 3255634 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 53.0 | 4.07e-01 | 100.0% | 67.2% |
| 3496954 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 51.0 | 3.78e-01 | 95.7% | 51.2% |
| 3482199 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.57 | 50.0 | 3.63e-01 | 93.0% | 40.0% |
| 3706524 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.57 | 52.0 | 4.45e-01 | 99.5% | 97.6% |
| 3419526 | 5.1.5.146 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_AT5G49610-like | 0.57 | 52.0 | 4.20e-01 | 98.4% | 75.3% |
| 3248518 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.56 | 34.0 | 4.03e-01 | 72.4% | 87.8% |
| 4888761 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 46.0 | 4.61e-01 | 85.9% | 87.4% |
| 4024178 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 50.0 | 3.91e-01 | 96.2% | 74.7% |
| 3408261 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.55 | 31.0 | 3.55e-01 | 90.8% | 71.9% |
| 3391128 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 49.0 | 3.78e-01 | 99.5% | 92.5% |
| 4940718 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 49.0 | 3.96e-01 | 100.0% | 68.8% |
| 3717566 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.54 | 49.0 | 4.36e-01 | 100.0% | 91.6% |
| 3715923 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.53 | 49.0 | 3.76e-01 | 100.0% | 54.5% |
| 4335306 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.53 | 34.0 | 4.00e-01 | 84.9% | 94.4% |
| 3245356 | 5.1.3.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase | 0.52 | 48.0 | 3.84e-01 | 100.0% | 84.7% |
| 5047424 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.52 | 29.0 | 3.65e-01 | 70.3% | 85.8% |
| 3729058 | 5.1.4.119 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C | 0.52 | 46.0 | 3.66e-01 | 96.2% | 76.9% |
| 4867468 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.52 | 20.0 | 3.25e-01 | 83.8% | 95.6% |
| 3725709 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 29.0 | 3.72e-01 | 80.0% | 92.7% |
| 3996555 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 26.0 | 3.35e-01 | 93.5% | 88.4% |
| 3917243 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.51 | 38.0 | 4.19e-01 | 86.5% | 95.3% |
| 3823729 | 5.1.4.222 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 | 0.51 | 46.0 | 3.74e-01 | 100.0% | 90.6% |
| 3213694 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.50 | 31.0 | 3.83e-01 | 73.0% | 99.1% |
| 3302013 | 5.1.5.137 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_At4g14310 | 0.50 | 44.0 | 3.39e-01 | 95.7% | 60.0% |
| 3927181 | 5.1.4.377 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_TULP_N | 0.50 | 46.0 | 3.61e-01 | 100.0% | 82.6% |
D2
high
residues 240-325
Domain cluster:
rep: IMGVR_UViG_3300003604_000018-3300003604-JGI26464J51801_10016209__D29-123
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yu0A02 | 2.80.20.10 | Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein | 0.74 | 67.0 | 5.58e-01 | 100.0% | 65.8% |
| 2xc8A00 | 2.60.40.2980 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 55.0 | 4.97e-01 | 100.0% | 75.2% |
| 1xdpA02 | 3.30.1840.10 | Alpha Beta › 2-Layer Sandwich › polyphosphate kinase like › Polyphosphate kinase middle domain | 0.62 | 44.0 | 3.38e-01 | 75.6% | 62.9% |
| 1f94A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.57 | 39.0 | 4.36e-01 | 100.0% | 96.8% |
| 3qvnA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.56 | 47.0 | 4.34e-01 | 97.7% | 88.9% |
| 4do8A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.54 | 38.0 | 4.11e-01 | 100.0% | 97.0% |
| 7bjkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.53 | 44.0 | 4.10e-01 | 94.2% | 83.2% |
| 2kcuA00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.53 | 39.0 | 3.21e-01 | 80.2% | 75.9% |
| 1xreA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.52 | 44.0 | 4.09e-01 | 97.7% | 90.2% |
| 1x5zA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.80e-01 | 93.0% | 70.5% |
| 2dbjA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 43.0 | 3.98e-01 | 93.0% | 78.0% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.94e-01 | 90.7% | 79.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8264 | 382.1.1.2 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP | 0.57 | 39.0 | 4.36e-01 | 100.0% | 96.8% |
| 3936120 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.54 | 37.0 | 2.49e-01 | 70.9% | 51.6% |
| 3929928 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 37.0 | 2.47e-01 | 75.6% | 71.8% |
| 3166220 | 304.8.1.29 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF695 | 0.51 | 42.0 | 3.71e-01 | 93.0% | 89.2% |
| 3522284 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 44.0 | 3.60e-01 | 100.0% | 68.2% |
| 5033992 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 3.58e-01 | 93.0% | 62.6% |
| 162921 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.50 | 43.0 | 3.80e-01 | 93.0% | 68.5% |
| 3616256 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.50 | 42.0 | 3.88e-01 | 93.0% | 82.7% |