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MH494197.1__AXC38889.1__X__00177
Bact-VirMH494197.1__AXC38889.1__X__00177
Identity
- Accession:
- MH494197 ↗
- Kingdom:
- phage
Quality
66.1
mean pLDDT
Taxonomy
TaxID: 2267248
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-77
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kiwA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.69 | 57.0 | 5.03e-01 | 90.0% | 88.4% |
| 2nobA03 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.64 | 50.0 | 4.05e-01 | 90.0% | 71.4% |
| 2qr4A02 | 1.10.287.830 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like | 0.58 | 42.0 | 4.51e-01 | 83.3% | 97.9% |
| 6q3wB02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.58 | 50.0 | 3.62e-01 | 96.7% | 43.4% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.57 | 44.0 | 3.33e-01 | 83.3% | 42.1% |
| 4a18O00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.57 | 47.0 | 3.73e-01 | 96.7% | 72.4% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.56 | 42.0 | 3.79e-01 | 86.7% | 81.9% |
| 4navA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 43.0 | 3.08e-01 | 86.7% | 96.1% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.53 | 44.0 | 3.39e-01 | 93.3% | 46.5% |
| 3ewiB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.53 | 44.0 | 3.38e-01 | 100.0% | 87.3% |
| 3f42A00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.51 | 39.0 | 3.40e-01 | 83.3% | 59.1% |
| 3mmzC00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.50 | 42.0 | 3.20e-01 | 100.0% | 82.7% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5031058 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.62 | 40.0 | 3.87e-01 | 98.3% | 57.1% |
| 3663086 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.56 | 47.0 | 3.13e-01 | 98.3% | 97.0% |
| 4191800 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.53 | 38.0 | 3.96e-01 | 80.0% | 96.4% |
| 3620852 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.53 | 38.0 | 3.95e-01 | 80.0% | 96.4% |
| 1681145 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 41.0 | 3.07e-01 | 91.7% | 71.5% |
| 3279985 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 37.0 | 2.92e-01 | 80.0% | 66.0% |
| 3725284 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 37.0 | 3.27e-01 | 80.0% | 97.9% |