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MH494197.1__AXC39121.1__X__00409
Bact-VirMH494197.1__AXC39121.1__X__00409
Identity
- Accession:
- MH494197 ↗
- Kingdom:
- phage
Quality
76.8
mean pLDDT
Taxonomy
TaxID: 2267248
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-57
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h0nA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.78 | 69.0 | 4.69e-01 | 100.0% | 29.4% |
| 3i9fB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.76 | 59.0 | 4.23e-01 | 100.0% | 29.0% |
| 1xcjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.74 | 65.0 | 4.30e-01 | 100.0% | 25.8% |
| 3m6iA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.74 | 65.0 | 4.85e-01 | 100.0% | 44.0% |
| 2gs9A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 58.0 | 4.00e-01 | 100.0% | 26.2% |
| 2gn4B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 61.0 | 4.04e-01 | 100.0% | 26.0% |
| 3m33A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.70 | 57.0 | 3.97e-01 | 100.0% | 25.6% |
| 1foaA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.70 | 60.0 | 4.12e-01 | 100.0% | 40.8% |
| 6ckmA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.69 | 60.0 | 4.04e-01 | 100.0% | 30.2% |
| 3ceaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.69 | 56.0 | 4.21e-01 | 100.0% | 35.6% |
| 6xehA01 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 53.0 | 4.31e-01 | 86.0% | 45.9% |
| 4nheB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.68 | 54.0 | 4.38e-01 | 100.0% | 44.7% |
| 3rpzA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.68 | 57.0 | 3.65e-01 | 100.0% | 19.5% |
| 1ne2B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 59.0 | 4.16e-01 | 100.0% | 49.2% |
| 3otxB01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.66 | 56.0 | 3.63e-01 | 100.0% | 31.5% |
| 2zpaA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 56.0 | 4.29e-01 | 100.0% | 56.6% |
| 8sl7B01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.64 | 53.0 | 3.58e-01 | 100.0% | 44.6% |
| 4g4sP00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.64 | 47.0 | 3.38e-01 | 82.5% | 33.7% |
| 2n3zA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 49.0 | 4.19e-01 | 89.5% | 50.5% |
| 3moiA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 50.0 | 3.68e-01 | 100.0% | 30.3% |
| 1jykA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.61 | 49.0 | 3.45e-01 | 100.0% | 27.9% |
| 2x49A04 | 3.40.50.12790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 | 0.61 | 51.0 | 4.39e-01 | 100.0% | 57.6% |
| 5ysqB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.61 | 50.0 | 3.32e-01 | 100.0% | 33.2% |
| 6jimB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 50.0 | 3.93e-01 | 100.0% | 58.6% |
| 2pljA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.58 | 47.0 | 3.29e-01 | 98.2% | 86.9% |
| 2dgmA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 46.0 | 3.07e-01 | 100.0% | 36.1% |
| 1gtkA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 48.0 | 4.00e-01 | 98.2% | 53.0% |
| 3rojA02 | 3.40.190.90 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.56 | 48.0 | 3.54e-01 | 100.0% | 50.9% |
| 4bnqB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.56 | 41.0 | 2.94e-01 | 80.7% | 67.2% |
| 4ag6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 45.0 | 3.12e-01 | 100.0% | 91.0% |
| 2zsgA01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.55 | 45.0 | 3.62e-01 | 100.0% | 78.1% |
| 7ejgC01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 42.0 | 3.66e-01 | 98.2% | 60.2% |
| 3delB02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 40.0 | 3.58e-01 | 98.2% | 76.3% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945625 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.79 | 66.0 | 4.59e-01 | 100.0% | 29.4% |
| 5037827 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.77 | 67.0 | 4.32e-01 | 100.0% | 23.3% |
| 4623986 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.76 | 61.0 | 3.99e-01 | 100.0% | 20.4% |
| 4475586 | 2003.1.1.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH | 0.73 | 57.0 | 3.87e-01 | 100.0% | 23.3% |
| 4090144 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.73 | 57.0 | 3.50e-01 | 100.0% | 14.4% |
| 4162672 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.73 | 60.0 | 4.28e-01 | 100.0% | 31.2% |
| 5012056 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.72 | 59.0 | 4.13e-01 | 100.0% | 27.9% |
| 5014377 | 2006.1.1.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_PPase | 0.72 | 55.0 | 4.07e-01 | 84.2% | 36.8% |
| 4932560 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.71 | 62.0 | 4.98e-01 | 100.0% | 51.3% |
| 3721635 | 2003.1.1.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 | 0.71 | 63.0 | 4.43e-01 | 100.0% | 32.1% |
| 4016143 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.71 | 62.0 | 3.79e-01 | 100.0% | 17.1% |
| 5067989 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.71 | 61.0 | 3.83e-01 | 100.0% | 19.4% |
| 3730482 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.70 | 61.0 | 3.77e-01 | 100.0% | 16.8% |
| 3688826 | 2003.1.1.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Semialdhyde_dh | 0.70 | 61.0 | 3.80e-01 | 100.0% | 17.3% |
| 138718 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.70 | 57.0 | 3.97e-01 | 100.0% | 25.6% |
| 4515381 | 2003.1.1.76 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SDH_C | 0.70 | 58.0 | 4.06e-01 | 100.0% | 27.7% |
| 4417887 | 2003.1.1.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH | 0.70 | 55.0 | 4.08e-01 | 100.0% | 32.9% |
| 3289922 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.69 | 55.0 | 4.22e-01 | 100.0% | 37.1% |
| 4975161 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.69 | 60.0 | 4.03e-01 | 100.0% | 25.9% |
| 3722443 | 2003.1.1.143 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA, NAD_binding_10 | 0.68 | 59.0 | 3.67e-01 | 100.0% | 18.3% |
| 3289633 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.68 | 57.0 | 4.19e-01 | 94.7% | 41.3% |
| 3688986 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.68 | 59.0 | 3.72e-01 | 100.0% | 20.0% |
| 4057206 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 52.0 | 4.45e-01 | 86.0% | 65.3% |
| 4955129 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.67 | 54.0 | 4.01e-01 | 96.5% | 33.1% |
| 3988256 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 45.0 | 3.63e-01 | 75.4% | 35.5% |
| 4599869 | 2003.1.10.23 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp | 0.66 | 49.0 | 4.38e-01 | 82.5% | 94.1% |
| 3977442 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.65 | 54.0 | 4.12e-01 | 100.0% | 38.1% |
| 4319691 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.63 | 54.0 | 4.39e-01 | 100.0% | 83.5% |
| 3596401 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 48.0 | 3.78e-01 | 87.7% | 54.8% |
| 5078035 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.62 | 46.0 | 4.04e-01 | 82.5% | 86.7% |
| 4974488 | 7512.1.1.15 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyphos_transf | 0.61 | 51.0 | 3.51e-01 | 100.0% | 26.3% |
| 4805483 | 7512.1.1.91 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › SH3_9, FUT8_N_cat | 0.61 | 52.0 | 3.88e-01 | 98.2% | 45.1% |
| 4965500 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.59 | 52.0 | 3.82e-01 | 98.2% | 83.3% |
| 4265499 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.58 | 51.0 | 4.07e-01 | 98.2% | 60.0% |
| 4985445 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.58 | 49.0 | 4.00e-01 | 98.2% | 50.5% |
| 4548530 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.57 | 48.0 | 4.06e-01 | 98.2% | 55.8% |
| 4037996 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.57 | 48.0 | 3.14e-01 | 98.2% | 22.1% |
| 4076595 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.57 | 48.0 | 4.08e-01 | 100.0% | 56.8% |
| 4292827 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.56 | 48.0 | 3.29e-01 | 100.0% | 26.3% |
| 3481506 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.56 | 49.0 | 3.94e-01 | 98.2% | 72.2% |
| 3307549 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.56 | 48.0 | 3.52e-01 | 100.0% | 35.5% |
| 3977698 | 2004.1.1.194 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 | 0.55 | 44.0 | 3.20e-01 | 100.0% | 39.0% |
| 3383717 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.53 | 42.0 | 3.44e-01 | 89.5% | 45.5% |
| 4303181 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.53 | 41.0 | 2.88e-01 | 86.0% | 65.9% |
| 3642722 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.53 | 43.0 | 3.51e-01 | 94.7% | 83.9% |
| 4162753 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.53 | 47.0 | 3.93e-01 | 100.0% | 60.0% |
| 4576389 | 7523.1.1.6 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam | 0.53 | 47.0 | 4.68e-01 | 100.0% | 100.0% |
| 4558199 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.50 | 39.0 | 3.11e-01 | 96.5% | 64.1% |
D2
medium
residues 58-176