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MH494197.1__AXC39252.1__X__00540

Bact-Vir

MH494197.1__AXC39252.1__X__00540

Identity

Accession:
MH494197 ↗
Kingdom:
phage

Quality

76.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Asteriusvirus› Escherichia_phage_CMSTMSU

TaxID: 2267248

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-66
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zrpA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.70 38.0 3.03e-01 98.4% 27.7%
2xadA00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.64 44.0 2.90e-01 72.1% 17.0%
8b0qA01 3.30.420.340 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain 0.61 43.0 3.06e-01 73.8% 100.0%
3nftA00 1.20.1710.10 Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like 0.60 49.0 3.21e-01 88.5% 66.0%
3e18A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 44.0 3.01e-01 80.3% 99.5%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 3.07e-01 72.1% 32.1%
2o8bB02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.57 42.0 2.92e-01 77.0% 76.3%
2p92A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.57 42.0 3.57e-01 77.0% 52.6%
1nd7A01 3.90.1750.10 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Hect, E3 ligase catalytic domains 0.56 40.0 2.90e-01 75.4% 51.9%
2q83A02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.54 44.0 2.98e-01 90.2% 72.5%
4g7nA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 37.0 2.95e-01 72.1% 80.2%
3h1dA01 3.90.1750.10 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Hect, E3 ligase catalytic domains 0.52 37.0 2.66e-01 75.4% 46.8%
5ly3A02 3.30.420.570 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.51 37.0 2.62e-01 82.0% 58.0%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3640935 3543.1.1.4 ↗ alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF716 0.71 50.0 3.30e-01 73.8% 20.0%
4990094 304.56.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.66 44.0 4.27e-01 70.5% 61.4%
3388240 3226.1.1.1 ↗ alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Xan_ur_permease 0.62 46.0 2.79e-01 78.7% 69.5%
4024937 109.4.1.77 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › AAR2 0.62 41.0 2.95e-01 100.0% 22.7%
4090235 1189.1.1.2 ↗ alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG_B 0.62 50.0 3.14e-01 88.5% 82.4%
4959101 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.62 50.0 3.29e-01 88.5% 32.7%
4391257 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.61 49.0 2.94e-01 88.5% 89.1%
3979947 3226.1.1.1 ↗ alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Xan_ur_permease 0.60 42.0 2.58e-01 75.4% 66.7%
3261682 601.23.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.58 43.0 2.79e-01 82.0% 34.6%
3622076 610.2.1.1 ↗ alpha arrays › ERP29 C domain-like › Helical domain of Sec23/24 › Helical domain of Sec23/24 › Sec23_helical 0.58 50.0 4.11e-01 100.0% 81.7%
3653328 610.2.1.1 ↗ alpha arrays › ERP29 C domain-like › Helical domain of Sec23/24 › Helical domain of Sec23/24 › Sec23_helical 0.58 46.0 4.25e-01 90.2% 75.0%
4977732 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.57 46.0 3.14e-01 88.5% 62.2%
3484069 610.2.1.0 ↗ alpha arrays › ERP29 C domain-like › Helical domain of Sec23/24 › Helical domain of Sec23/24 0.57 49.0 4.09e-01 100.0% 83.6%
None — 0.56 35.0 2.60e-01 73.8% 23.7%
3349591 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.55 50.0 3.16e-01 100.0% 73.4%
3782917 109.4.1.1289 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30856 0.55 47.0 2.90e-01 100.0% 15.7%
5029837 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 37.0 3.31e-01 73.8% 98.8%
3613028 320.4.1.3 ↗ a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB 0.52 41.0 3.37e-01 88.5% 67.8%
4965970 3226.1.1.1 ↗ alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Xan_ur_permease 0.51 44.0 2.68e-01 100.0% 59.6%
3813017 103.4.1.0 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.50 39.0 3.45e-01 100.0% 56.8%