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MH494197.1__AXC39270.1__X__00558
Bact-VirMH494197.1__AXC39270.1__X__00558
Identity
- Accession:
- MH494197 ↗
- Kingdom:
- phage
Quality
90.8
mean pLDDT
Taxonomy
TaxID: 2267248
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 51-152
Domain cluster:
rep: NC_021327__YP_008059129.1__M200-gp137__00087__D769-876
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qexA06 | 3.40.1820.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease H-like motif › DnaQ-like 3'-5' exonuclease | 0.80 | 67.0 | 7.08e-01 | 90.2% | 98.9% |
| 2gv9B06 | 1.10.132.60 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain | 0.59 | 53.0 | 4.24e-01 | 100.0% | 50.2% |
| 1wfwA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 32.0 | 3.69e-01 | 83.3% | 73.0% |
| 3qr8A01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.57 | 38.0 | 4.20e-01 | 74.5% | 83.3% |
| 2oyoA01 | 1.20.5.810 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › AhpD-like | 0.56 | 29.0 | 3.89e-01 | 70.6% | 98.1% |
| 1go3E01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 41.0 | 4.32e-01 | 78.4% | 96.8% |
| 4dapA01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 40.0 | 4.44e-01 | 81.4% | 97.5% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 30.0 | 3.51e-01 | 85.3% | 82.4% |
| 3go5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 34.0 | 3.94e-01 | 87.3% | 95.7% |
| 6v9qH01 | 3.30.70.2540 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 | 0.52 | 34.0 | 3.16e-01 | 98.0% | 51.9% |
| 2khiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 36.0 | 3.79e-01 | 74.5% | 78.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1256613 | 4969.1.1.0 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I | 0.82 | 77.0 | 6.33e-01 | 100.0% | 59.2% |
| 4978606 | 4969.1.1.0 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I | 0.69 | 54.0 | 4.70e-01 | 100.0% | 55.5% |
| 4183839 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.63 | 37.0 | 4.66e-01 | 73.5% | 100.0% |
| 3888226 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.52 | 32.0 | 3.62e-01 | 97.1% | 82.7% |