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MH494197.1__AXC39271.1__X__00559
Bact-VirMH494197.1__AXC39271.1__X__00559
Identity
- Accession:
- MH494197 ↗
- Kingdom:
- phage
Quality
88.5
mean pLDDT
Taxonomy
TaxID: 2267248
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-86
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4xaxB02 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.59 | 38.0 | 3.69e-01 | 75.6% | 56.6% |
| 7cluA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 39.0 | 3.88e-01 | 100.0% | 66.3% |
| 3mczA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 38.0 | 3.95e-01 | 100.0% | 72.0% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 38.0 | 3.43e-01 | 100.0% | 48.4% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 3.42e-01 | 100.0% | 47.3% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 35.0 | 3.64e-01 | 95.3% | 67.9% |
| 3lstA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 36.0 | 3.61e-01 | 98.8% | 66.3% |
| 3dp7B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 36.0 | 3.60e-01 | 100.0% | 64.5% |
| 3go5A04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 35.0 | 4.00e-01 | 90.7% | 92.1% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 37.0 | 3.28e-01 | 97.7% | 48.8% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 35.0 | 2.95e-01 | 100.0% | 39.1% |
| 1oltA02 | 1.10.10.920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 36.0 | 3.68e-01 | 100.0% | 75.3% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 33.0 | 3.41e-01 | 96.5% | 68.2% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929470 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.61 | 40.0 | 3.82e-01 | 100.0% | 56.2% |
| 3819614 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 39.0 | 4.12e-01 | 100.0% | 74.7% |
| 5067929 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 39.0 | 4.10e-01 | 100.0% | 72.5% |
| 3279254 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 40.0 | 4.10e-01 | 100.0% | 70.6% |
| 3632535 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.59 | 41.0 | 3.58e-01 | 72.1% | 76.9% |
| 4303638 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.58 | 39.0 | 4.14e-01 | 100.0% | 78.7% |
| 5004508 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.58 | 38.0 | 3.93e-01 | 100.0% | 69.0% |
| 4961645 | 101.1.2.934 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N | 0.58 | 40.0 | 3.97e-01 | 100.0% | 67.8% |
| 5019169 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.58 | 38.0 | 3.92e-01 | 100.0% | 71.2% |
| 5010521 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.58 | 39.0 | 3.79e-01 | 100.0% | 61.0% |
| 5071985 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 39.0 | 3.08e-01 | 100.0% | 33.0% |
| 5002415 | 101.1.2.728 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF31122 | 0.57 | 39.0 | 3.65e-01 | 100.0% | 55.5% |
| 5010033 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.57 | 38.0 | 3.97e-01 | 98.8% | 73.8% |
| 4952731 | 101.1.2.728 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF31122 | 0.57 | 39.0 | 3.75e-01 | 100.0% | 61.0% |
| 4022706 | 101.1.2.359 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD | 0.57 | 40.0 | 4.19e-01 | 100.0% | 81.2% |
| 3979813 | 101.19.1.1 ↗ | alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › HemN_C | 0.56 | 39.0 | 4.00e-01 | 100.0% | 76.2% |
| 5005434 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.56 | 38.0 | 3.74e-01 | 100.0% | 64.2% |
| 4199769 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.56 | 38.0 | 2.91e-01 | 100.0% | 28.2% |
| 4877083 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.56 | 38.0 | 3.35e-01 | 100.0% | 46.2% |
| 5018074 | 101.1.2.728 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF31122 | 0.56 | 37.0 | 3.47e-01 | 100.0% | 55.2% |
| 5038669 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.55 | 40.0 | 3.68e-01 | 100.0% | 57.4% |
| 3817423 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.55 | 37.0 | 3.30e-01 | 100.0% | 46.2% |
| 5032069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 41.0 | 4.00e-01 | 100.0% | 71.6% |
| 3815453 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.54 | 37.0 | 3.70e-01 | 100.0% | 66.7% |
| 5035277 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 3.03e-01 | 100.0% | 34.4% |
| 4668436 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.54 | 37.0 | 3.91e-01 | 100.0% | 81.3% |
| 3808197 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.54 | 37.0 | 3.16e-01 | 100.0% | 42.9% |
| 4962601 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 35.0 | 3.69e-01 | 100.0% | 76.0% |
| 5009797 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.52 | 35.0 | 3.23e-01 | 100.0% | 50.8% |
| 3387117 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 35.0 | 3.64e-01 | 100.0% | 75.0% |
| 4017983 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 37.0 | 3.73e-01 | 100.0% | 73.3% |
| 4028118 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 41.0 | 3.84e-01 | 100.0% | 70.5% |
| 4985673 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 38.0 | 3.76e-01 | 100.0% | 75.6% |
| 4021593 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 40.0 | 3.95e-01 | 100.0% | 77.9% |
| 3190571 | 101.1.2.359 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD | 0.50 | 39.0 | 3.56e-01 | 100.0% | 60.8% |
| 3691327 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 39.0 | 3.62e-01 | 100.0% | 64.3% |
| 4091854 | 311.1.1.2 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Band_3_cyto | 0.50 | 38.0 | 2.72e-01 | 84.9% | 81.0% |
D2
high
residues 120-217
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00136.27 best | DNA_pol_B | 24.7 | 1.40e-05 | 73.5% | 13.2% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4didB01 | 1.20.58.450 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cell division control protein 42 homolog | 0.62 | 52.0 | 5.01e-01 | 91.8% | 93.0% |
| 2cq8A01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.62 | 38.0 | 4.21e-01 | 100.0% | 76.5% |
| 3bqkA02 | 1.20.1310.20 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Duffy-antigen binding domain | 0.52 | 46.0 | 3.98e-01 | 100.0% | 64.5% |
| 1uyjA01 | 3.30.360.60 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.51 | 39.0 | 4.18e-01 | 96.9% | 97.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4978226 | 171.1.1.3 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_2 | 0.66 | 38.0 | 3.42e-01 | 88.8% | 40.0% |
| None | — | 0.65 | 56.0 | 4.20e-01 | 93.9% | 51.2% | |
| 3686004 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.62 | 53.0 | 3.96e-01 | 93.9% | 50.4% |
| 5035637 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.61 | 53.0 | 4.39e-01 | 98.0% | 93.9% |
| 3484904 | 7558.1.1.4 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › DAGAT | 0.59 | 44.0 | 3.11e-01 | 79.6% | 73.8% |
| 4400946 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.59 | 40.0 | 3.47e-01 | 100.0% | 45.3% |
| 3875985 | 109.1.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › Arc1p_N_like | 0.56 | 43.0 | 3.57e-01 | 82.7% | 92.2% |
| 3226198 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.55 | 47.0 | 2.90e-01 | 94.9% | 51.4% |
| 3264909 | 3614.1.1.0 ↗ | alpha arrays › T4 RNA ligase › T4 RNA ligase › T4 RNA ligase (Rnl1) C-terminal domain | 0.55 | 39.0 | 3.80e-01 | 92.9% | 68.6% |
| 4096166 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.53 | 45.0 | 3.35e-01 | 93.9% | 59.6% |
| 3728853 | 3767.1.1.0 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain | 0.52 | 41.0 | 3.58e-01 | 88.8% | 97.5% |
| 3999501 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.51 | 42.0 | 3.65e-01 | 92.9% | 92.0% |
| 5022177 | 3960.1.1.0 ↗ | alpha arrays › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain | 0.50 | 43.0 | 3.54e-01 | 95.9% | 89.2% |