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MH494197.1__AXC39274.1__X__00562

Bact-Vir

MH494197.1__AXC39274.1__X__00562

Identity

Accession:
MH494197 ↗
Kingdom:
phage

Quality

77.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 14-60
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mgkB00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.73 49.0 3.18e-01 70.2% 86.1%
3d79A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.70 47.0 4.05e-01 80.9% 44.6%
2oebA00 1.10.520.30 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain 0.62 47.0 3.37e-01 87.2% 33.6%
6wcsA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.59 41.0 2.69e-01 83.0% 16.3%
3nwoA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 47.0 3.00e-01 97.9% 61.9%
4hstA02 1.10.10.2580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Penicillin Acylase III; Chain A, Domain 2 0.58 41.0 3.77e-01 78.7% 55.4%
5a62A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 43.0 2.82e-01 95.7% 40.4%
1nnfA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 46.0 3.30e-01 100.0% 63.9%
2bzbA00 4.10.280.10 Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain 0.54 41.0 3.79e-01 83.0% 67.7%
1s68A01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.53 43.0 3.40e-01 97.9% 57.0%
3s6pG00 6.10.140.1660 Special › Helix non-globular › Helix Hairpins › 0.53 40.0 3.53e-01 83.0% 81.9%
3w15B00 6.10.280.230 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 39.0 3.44e-01 83.0% 59.7%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5067279 4335.1.1.1 a/b three-layered sandwiches › Nqo1 FMN-binding domain-like › Nqo1 FMN-binding domain-like › Nqo1 FMN-binding domain-like › Complex1_51K 0.57 40.0 2.84e-01 78.7% 41.2%
3433041 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 41.0 2.65e-01 87.2% 45.1%
3235626 210.1.6.1 a+b four layers › Ntn/PP2C › Ntn › Gamma-glutamyltranspeptidase-like › G_glu_transpept 0.56 44.0 2.65e-01 89.4% 45.0%
4990132 309.1.1.15 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › DEAD_assoc 0.56 42.0 2.81e-01 83.0% 82.1%
3364871 3711.1.1.4 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DOG1 0.56 42.0 2.80e-01 89.4% 79.1%
3899252 3978.1.1.2 alpha complex topology › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › FA_hydroxylase 0.54 42.0 2.78e-01 91.5% 43.0%
3953723 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.52 41.0 2.61e-01 91.5% 51.2%
4061231 207.1.1.169 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_14 0.51 35.0 2.36e-01 74.5% 29.8%