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MH494197.1__AXC39285.1__X__00573

Bact-Vir

MH494197.1__AXC39285.1__X__00573

Identity

Accession:
MH494197 ↗
Kingdom:
phage

Quality

78.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 46-108
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07068.18 best Gp23 67.2 2.60e-18 93.7% 14.7%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fewX02 3.30.1310.40 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › 0.58 45.0 3.93e-01 84.1% 98.9%
2ctfA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.54 45.0 3.85e-01 90.5% 64.7%
4h3sA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 38.0 2.46e-01 77.8% 24.1%
1suiA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 37.0 2.49e-01 71.4% 22.0%
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.52 31.0 3.29e-01 76.2% 67.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4564320 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.67 43.0 3.46e-01 76.2% 35.6%
5047497 1045.1.1.0 alpha bundles › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 0.61 39.0 3.91e-01 76.2% 63.1%
5000872 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.59 41.0 3.30e-01 90.5% 36.8%
4940072 1075.3.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 0.58 51.0 3.47e-01 100.0% 53.5%