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MH494197.1__AXC39308.1__X__00596
Bact-VirMH494197.1__AXC39308.1__X__00596
Identity
- Accession:
- MH494197 ↗
- Kingdom:
- phage
Quality
77.6
mean pLDDT
Taxonomy
TaxID: 2267248
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-54
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yjgA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.72 | 41.0 | 2.86e-01 | 84.6% | 19.1% |
| 3pg1A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.67 | 42.0 | 2.74e-01 | 76.9% | 15.6% |
| 1e1hB01 | 1.20.58.540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 41.0 | 3.18e-01 | 71.2% | 33.0% |
| 2qr4A02 | 1.10.287.830 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like | 0.62 | 37.0 | 3.85e-01 | 80.8% | 61.7% |
| 4gf0A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 46.0 | 3.83e-01 | 82.7% | 87.4% |
| 4xr7F02 | 1.10.287.3700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 42.0 | 3.51e-01 | 75.0% | 74.4% |
| 3f7xA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 47.0 | 3.56e-01 | 90.4% | 45.1% |
| 1pmtA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 45.0 | 3.79e-01 | 90.4% | 87.2% |
| 2jrjA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 34.0 | 3.49e-01 | 98.1% | 55.8% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.56 | 48.0 | 3.99e-01 | 100.0% | 60.0% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.56 | 43.0 | 3.29e-01 | 94.2% | 36.4% |
| 3mcwA00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.55 | 37.0 | 2.60e-01 | 71.2% | 19.0% |
| 6w9rB01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.55 | 43.0 | 3.23e-01 | 96.2% | 56.6% |
| 1epwA01 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.55 | 46.0 | 2.73e-01 | 92.3% | 14.8% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 45.0 | 3.45e-01 | 94.2% | 51.6% |
| 3m4aA03 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.54 | 36.0 | 2.90e-01 | 71.2% | 79.7% |
| 4bl7A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 42.0 | 3.48e-01 | 90.4% | 71.8% |
| 7qjnA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 46.0 | 2.92e-01 | 98.1% | 25.3% |
| 3p9dE01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.53 | 41.0 | 2.76e-01 | 98.1% | 42.3% |
| 6ui4A01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.52 | 46.0 | 3.87e-01 | 100.0% | 63.6% |
| 4byfC01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.52 | 44.0 | 3.67e-01 | 94.2% | 80.9% |
| 2oycA02 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.52 | 38.0 | 2.89e-01 | 78.8% | 59.0% |
| 4dsfA04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.52 | 38.0 | 3.08e-01 | 82.7% | 57.3% |
| 3hwcA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.52 | 45.0 | 3.00e-01 | 100.0% | 41.4% |
| 3cdhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 3.09e-01 | 90.4% | 47.0% |
| 1a9xA07 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.51 | 37.0 | 3.65e-01 | 86.5% | 74.5% |
| 2obpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 3.06e-01 | 73.1% | 48.1% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 43.0 | 3.18e-01 | 100.0% | 59.1% |
| 5m7oA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 40.0 | 2.82e-01 | 86.5% | 55.0% |
| 2gsqA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 38.0 | 3.32e-01 | 90.4% | 83.0% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4133191 | 601.8.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Outer surface protein C (OspC) › Outer surface protein C (OspC) › Lipoprotein_6 | 0.73 | 42.0 | 2.81e-01 | 84.6% | 17.1% |
| 3200399 | 109.4.1.913 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TBCD | 0.72 | 42.0 | 2.65e-01 | 98.1% | 10.9% |
| 3597508 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.70 | 49.0 | 4.25e-01 | 73.1% | 51.2% |
| 5070038 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 57.0 | 4.55e-01 | 88.5% | 69.0% |
| 5069502 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 55.0 | 4.48e-01 | 88.5% | 73.7% |
| 5062173 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 54.0 | 4.18e-01 | 88.5% | 57.4% |
| 3537550 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.64 | 50.0 | 3.10e-01 | 84.6% | 35.3% |
| 3470423 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.64 | 50.0 | 3.16e-01 | 84.6% | 30.6% |
| 3712415 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.59 | 40.0 | 2.75e-01 | 71.2% | 78.5% |
| 3624062 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 40.0 | 2.40e-01 | 82.7% | 8.9% |
| 3717906 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.59 | 40.0 | 2.69e-01 | 71.2% | 71.2% |
| 3608516 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.57 | 39.0 | 3.04e-01 | 73.1% | 83.3% |
| 3242948 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.57 | 43.0 | 2.92e-01 | 88.5% | 36.0% |
| 3176201 | 3567.1.1.159 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › PF29918 | 0.56 | 49.0 | 3.27e-01 | 100.0% | 81.9% |
| 3717247 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.56 | 48.0 | 3.18e-01 | 100.0% | 51.4% |
| 3588649 | 3696.1.1.4 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › SNF2_assoc | 0.56 | 38.0 | 3.21e-01 | 82.7% | 41.2% |
| 3711938 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.55 | 41.0 | 3.48e-01 | 78.8% | 94.1% |
| 5070087 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.55 | 40.0 | 3.33e-01 | 86.5% | 47.1% |
| 3731212 | 192.24.1.0 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain | 0.53 | 41.0 | 3.46e-01 | 82.7% | 98.8% |
| 4110529 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.53 | 42.0 | 2.88e-01 | 90.4% | 86.3% |
| 3181095 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.53 | 42.0 | 2.77e-01 | 86.5% | 40.0% |
| 3614888 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.52 | 43.0 | 3.57e-01 | 100.0% | 72.4% |
| 4929718 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 34.0 | 2.84e-01 | 75.0% | 34.3% |
| 3573750 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 45.0 | 3.40e-01 | 100.0% | 60.8% |
| 4945146 | 242.2.1.0 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like | 0.51 | 36.0 | 3.72e-01 | 73.1% | 76.0% |
| 3622196 | 604.1.1.63 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 | 0.51 | 40.0 | 3.03e-01 | 84.6% | 36.7% |
| 3686550 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 41.0 | 2.98e-01 | 94.2% | 60.0% |
| 4251053 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.51 | 38.0 | 2.48e-01 | 84.6% | 18.0% |