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MH494197.1__AXC39333.1__X__00621
Bact-VirMH494197.1__AXC39333.1__X__00621
Identity
- Accession:
- MH494197 ↗
- Kingdom:
- phage
Quality
76.8
mean pLDDT
Taxonomy
TaxID: 2267248
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 64-127
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gasB02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 50.0 | 3.69e-01 | 78.1% | 42.3% |
| 1rfeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 49.0 | 3.89e-01 | 78.1% | 48.5% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.67 | 50.0 | 3.97e-01 | 79.7% | 50.8% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.67 | 49.0 | 3.76e-01 | 78.1% | 45.8% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 48.0 | 3.78e-01 | 78.1% | 45.0% |
| 2hhzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 46.0 | 3.70e-01 | 78.1% | 48.6% |
| 2d8bA01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.64 | 55.0 | 4.33e-01 | 98.4% | 55.0% |
| 1gn4A02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.63 | 54.0 | 4.56e-01 | 100.0% | 79.1% |
| 1t9mA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 44.0 | 3.20e-01 | 79.7% | 33.3% |
| 2xfaA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.60 | 51.0 | 4.04e-01 | 100.0% | 58.0% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 42.0 | 3.40e-01 | 78.1% | 51.9% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 43.0 | 3.94e-01 | 79.7% | 61.6% |
| 4wgkA02 | 2.60.40.2300 | Mainly Beta › Sandwich › Immunoglobulin-like › Neutral/alkaline non-lysosomal ceramidase, C-terminal domain | 0.58 | 44.0 | 3.53e-01 | 82.8% | 60.9% |
| 2xy1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 43.0 | 3.74e-01 | 79.7% | 64.9% |
| 1y07B01 | 6.20.90.10 | Special › Other non-globular › SH3 type barrels. › | 0.57 | 33.0 | 3.89e-01 | 79.7% | 100.0% |
| 3doaA03 | 3.40.970.40 | Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › fibrinogen binding protein from staphylococcus aureus domain like | 0.57 | 33.0 | 3.83e-01 | 73.4% | 83.7% |
| 4ksnA00 | 6.20.250.80 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.56 | 38.0 | 3.83e-01 | 70.3% | 95.4% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.56 | 39.0 | 3.93e-01 | 87.5% | 71.2% |
| 4pjeE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 3.52e-01 | 79.7% | 66.7% |
| 3qt2A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 39.0 | 3.51e-01 | 76.6% | 51.5% |
| 2k2dA00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.55 | 34.0 | 3.70e-01 | 71.9% | 80.9% |
| 4czwA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 43.0 | 2.72e-01 | 90.6% | 65.3% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.55 | 41.0 | 3.31e-01 | 79.7% | 50.8% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.54 | 37.0 | 3.92e-01 | 71.9% | 96.4% |
| 1vziA01 | 2.20.28.100 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Desulphoferrodoxin, N-terminal domain | 0.54 | 32.0 | 3.69e-01 | 76.6% | 94.7% |
| 4x83A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.36e-01 | 79.7% | 56.9% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 39.0 | 3.62e-01 | 96.9% | 61.8% |
| 3gohA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.51 | 36.0 | 2.57e-01 | 73.4% | 98.9% |
| 4gu4A01 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.51 | 25.0 | 2.96e-01 | 100.0% | 51.2% |
| 1pqzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.26e-01 | 79.7% | 65.3% |
| 2zuoA08 | 2.30.30.620 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 37.0 | 3.90e-01 | 79.7% | 87.9% |
| 2ww8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 37.0 | 3.21e-01 | 79.7% | 50.9% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2709107 | 1059.1.1.1 ↗ | a+b two layers › Omega-3 polyunsaturated fatty acid synthase subunit PfaD N-terminal domain › Omega-3 polyunsaturated fatty acid synthase subunit PfaD N-terminal domain › Omega-3 polyunsaturated fatty acid synthase subunit PfaD N-terminal domain › PfaD_N | 0.65 | 52.0 | 5.08e-01 | 85.9% | 79.7% |
| 3235447 | 821.1.1.8 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › ANKLE2_3rd | 0.64 | 46.0 | 4.18e-01 | 78.1% | 100.0% |
| 3226989 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.63 | 43.0 | 4.57e-01 | 71.9% | 83.6% |
| 5078864 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.63 | 52.0 | 4.30e-01 | 100.0% | 52.7% |
| 5070290 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.61 | 44.0 | 3.57e-01 | 76.6% | 56.8% |
| 3892736 | 103.1.1.67 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UPF0515 | 0.61 | 38.0 | 4.35e-01 | 78.1% | 90.9% |
| 4963432 | 4076.2.1.7 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › DUF5817 | 0.61 | 43.0 | 3.88e-01 | 73.4% | 63.5% |
| 4981108 | 375.1.1.331 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5817 | 0.61 | 41.0 | 4.77e-01 | 70.3% | 100.0% |
| 3581088 | 3945.1.1.0 ↗ | alpha superhelices › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain | 0.60 | 52.0 | 4.06e-01 | 100.0% | 48.3% |
| 4947213 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.60 | 41.0 | 4.38e-01 | 70.3% | 87.3% |
| 3351981 | 3792.1.1.2 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd | 0.60 | 44.0 | 3.80e-01 | 79.7% | 49.5% |
| 1153993 | 375.1.2.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Desulforedoxin › SOR_N | 0.60 | 37.0 | 4.22e-01 | 81.2% | 100.0% |
| 4956150 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 41.0 | 4.38e-01 | 73.4% | 94.5% |
| 3809044 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 38.0 | 4.25e-01 | 76.6% | 91.1% |
| 5034126 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.59 | 43.0 | 4.42e-01 | 75.0% | 88.3% |
| 5060529 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.59 | 41.0 | 3.99e-01 | 71.9% | 70.0% |
| 4064699 | 327.6.1.8 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › PF29609 | 0.58 | 43.0 | 3.49e-01 | 79.7% | 79.2% |
| 4959767 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.58 | 43.0 | 4.45e-01 | 78.1% | 88.3% |
| 3500189 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.58 | 43.0 | 3.79e-01 | 79.7% | 62.1% |
| 3236126 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.58 | 43.0 | 3.51e-01 | 79.7% | 77.6% |
| 4950325 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.58 | 42.0 | 3.81e-01 | 76.6% | 90.6% |
| 3796258 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.58 | 43.0 | 4.16e-01 | 96.9% | 72.0% |
| 5052959 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 40.0 | 4.25e-01 | 75.0% | 92.7% |
| 3687173 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.56 | 48.0 | 3.67e-01 | 100.0% | 80.0% |
| 4991529 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.56 | 41.0 | 4.23e-01 | 78.1% | 86.7% |
| 3447675 | 11.2.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 | 0.56 | 41.0 | 3.41e-01 | 79.7% | 59.1% |
| 3969578 | 3268.1.1.0 ↗ | a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase | 0.55 | 43.0 | 4.55e-01 | 92.2% | 100.0% |
| 3258564 | 11.1.1.801 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 | 0.55 | 40.0 | 3.18e-01 | 79.7% | 48.3% |
| 3244632 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 41.0 | 3.48e-01 | 79.7% | 59.0% |
| 3813966 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.54 | 41.0 | 3.97e-01 | 98.4% | 73.3% |
| 4870267 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 3.38e-01 | 78.1% | 49.5% |
| 1063821 | 3707.1.1.1 ↗ | a+b two layers › SdbC C-terminal domain › SdbC C-terminal domain › SdbC C-terminal domain › SdbC_C | 0.54 | 36.0 | 3.73e-01 | 70.3% | 85.5% |
| 4505050 | 148.1.3.27 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_10 | 0.53 | 37.0 | 2.89e-01 | 70.3% | 97.9% |
| 5076162 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.52 | 38.0 | 2.48e-01 | 85.9% | 29.3% |
| 3958275 | 3430.1.1.0 ↗ | a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain | 0.52 | 36.0 | 3.17e-01 | 71.9% | 77.9% |
| 3775177 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.52 | 38.0 | 3.29e-01 | 79.7% | 52.4% |
| 3394297 | 198.1.1.4 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF3456 | 0.52 | 42.0 | 3.39e-01 | 92.2% | 66.7% |
| 5027909 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 34.0 | 3.47e-01 | 70.3% | 73.3% |
| 5059852 | 375.1.2.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Desulforedoxin | 0.51 | 31.0 | 3.49e-01 | 79.7% | 97.5% |
| 2640865 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 34.0 | 3.64e-01 | 71.9% | 96.4% |
| 4956917 | 11.1.1.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD | 0.50 | 36.0 | 3.13e-01 | 78.1% | 61.9% |
D2
medium
residues 1-61_128-149