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MH494197.1__AXC39361.1__X__00649
Bact-VirMH494197.1__AXC39361.1__X__00649
Identity
- Accession:
- MH494197 ↗
- Kingdom:
- phage
Quality
82.1
mean pLDDT
Taxonomy
TaxID: 2267248
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-52
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ub4A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 51.0 | 4.06e-01 | 85.7% | 38.8% |
| 2cg7A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.66 | 47.0 | 4.86e-01 | 93.9% | 80.4% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 45.0 | 4.14e-01 | 85.7% | 55.6% |
| 1v6zA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.63 | 53.0 | 4.93e-01 | 100.0% | 87.7% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 48.0 | 3.99e-01 | 89.8% | 58.5% |
| 3p24A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 52.0 | 3.73e-01 | 100.0% | 42.5% |
| 3mqgA02 | 2.20.70.110 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.61 | 39.0 | 4.14e-01 | 91.8% | 79.5% |
| 2q07A03 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.60 | 49.0 | 4.55e-01 | 98.0% | 92.4% |
| 3mcaA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 45.0 | 3.73e-01 | 87.8% | 52.9% |
| 1dm9A00 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.58 | 49.0 | 3.91e-01 | 98.0% | 74.0% |
| 2efiA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 3.35e-01 | 83.7% | 38.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 42.0 | 3.70e-01 | 95.9% | 53.4% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.56 | 38.0 | 3.44e-01 | 77.6% | 49.3% |
| 3md7A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 45.0 | 2.83e-01 | 93.9% | 37.4% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 43.0 | 3.42e-01 | 100.0% | 39.5% |
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 41.0 | 4.16e-01 | 87.8% | 81.2% |
| 1r5bA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 43.0 | 3.44e-01 | 89.8% | 58.2% |
| 2xrcC04 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 45.0 | 3.09e-01 | 93.9% | 75.3% |
| 1llnA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.55 | 47.0 | 3.26e-01 | 100.0% | 41.7% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 43.0 | 3.42e-01 | 98.0% | 58.2% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 46.0 | 4.19e-01 | 98.0% | 82.4% |
| 3dohA01 | 2.60.40.2180 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 42.0 | 3.25e-01 | 98.0% | 60.7% |
| 1nnxA00 | 2.40.50.200 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Bacterial OB-fold | 0.52 | 43.0 | 3.60e-01 | 100.0% | 83.9% |
| 2c9oB02 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.51 | 42.0 | 3.27e-01 | 93.9% | 74.3% |
| 6klsA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.50 | 41.0 | 3.49e-01 | 100.0% | 87.2% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3480221 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.71 | 47.0 | 4.28e-01 | 87.8% | 52.3% |
| 3275404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 45.0 | 4.21e-01 | 83.7% | 56.7% |
| 4123274 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.67 | 50.0 | 4.87e-01 | 89.8% | 72.7% |
| 4654204 | 4.1.1.52 ↗ | beta barrels › SH3 › SH3 › SH3 › ZapC_C | 0.67 | 52.0 | 4.29e-01 | 93.9% | 47.2% |
| 3199259 | 4.1.1.286 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7072 | 0.66 | 47.0 | 4.36e-01 | 85.7% | 58.5% |
| 3414167 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 48.0 | 3.18e-01 | 95.9% | 19.0% |
| 3721062 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.65 | 48.0 | 4.05e-01 | 85.7% | 47.1% |
| 4317167 | 4.1.1.52 ↗ | beta barrels › SH3 › SH3 › SH3 › ZapC_C | 0.65 | 50.0 | 4.29e-01 | 93.9% | 52.5% |
| 3980990 | 70.3.1.12 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 | 0.65 | 53.0 | 4.52e-01 | 95.9% | 89.4% |
| 3707347 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 44.0 | 4.26e-01 | 83.7% | 63.6% |
| 4433128 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.64 | 56.0 | 4.54e-01 | 100.0% | 98.9% |
| 4145938 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.64 | 55.0 | 4.46e-01 | 100.0% | 92.0% |
| 5054112 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 49.0 | 4.47e-01 | 83.7% | 81.5% |
| 4422251 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.63 | 44.0 | 4.41e-01 | 85.7% | 72.0% |
| 5075127 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.62 | 50.0 | 4.33e-01 | 91.8% | 62.5% |
| 3623941 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.62 | 47.0 | 4.84e-01 | 91.8% | 88.9% |
| 4950268 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.62 | 45.0 | 4.28e-01 | 89.8% | 65.0% |
| 3503815 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 45.0 | 3.80e-01 | 95.9% | 45.9% |
| 3233889 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.61 | 40.0 | 2.53e-01 | 89.8% | 12.5% |
| 3465976 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 3.90e-01 | 85.7% | 55.4% |
| 3761318 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.60 | 50.0 | 4.54e-01 | 95.9% | 74.3% |
| 4321173 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.60 | 45.0 | 4.28e-01 | 95.9% | 69.0% |
| 3513418 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.60 | 45.0 | 4.71e-01 | 89.8% | 88.9% |
| 169 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.60 | 49.0 | 4.55e-01 | 98.0% | 92.4% |
| 5082741 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.59 | 47.0 | 4.26e-01 | 91.8% | 94.3% |
| 3326132 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 42.0 | 3.86e-01 | 95.9% | 58.5% |
| 3828348 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 42.0 | 3.86e-01 | 98.0% | 58.5% |
| 3928377 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.57 | 48.0 | 3.28e-01 | 100.0% | 35.4% |
| 3302166 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.57 | 42.0 | 3.86e-01 | 98.0% | 61.5% |
| 3824699 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.56 | 41.0 | 3.82e-01 | 98.0% | 61.5% |
| 3774694 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.56 | 50.0 | 3.35e-01 | 100.0% | 27.8% |
| 3570369 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 46.0 | 3.81e-01 | 95.9% | 51.1% |
| 3622139 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 44.0 | 3.63e-01 | 95.9% | 47.8% |
| 3635354 | 2004.1.1.685 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › HET | 0.55 | 45.0 | 2.98e-01 | 95.9% | 29.7% |
| 4172447 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 42.0 | 3.74e-01 | 87.8% | 65.3% |
| 5038496 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.53 | 34.0 | 3.66e-01 | 79.6% | 80.0% |
| 3936758 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.52 | 36.0 | 3.45e-01 | 91.8% | 58.5% |
| 5037776 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.52 | 40.0 | 2.78e-01 | 98.0% | 39.1% |
| 3368743 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.51 | 34.0 | 3.21e-01 | 75.5% | 56.7% |