←Back to structures
MH494197.1__AXC39388.1__X__00676
Bact-VirMH494197.1__AXC39388.1__X__00676
Identity
- Accession:
- MH494197 ↗
- Kingdom:
- phage
Quality
75.8
mean pLDDT
Taxonomy
TaxID: 2267248
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-80
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zpjA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 48.0 | 3.40e-01 | 75.4% | 91.8% |
| 3kbgA01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.64 | 46.0 | 4.09e-01 | 75.4% | 56.8% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.64 | 43.0 | 4.64e-01 | 71.9% | 97.8% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 43.0 | 3.94e-01 | 71.9% | 66.7% |
| 2xzmW01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.62 | 45.0 | 3.58e-01 | 77.2% | 41.5% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 41.0 | 3.99e-01 | 73.7% | 61.9% |
| 4gyiA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 44.0 | 3.80e-01 | 78.9% | 65.3% |
| 1clwA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.59 | 42.0 | 2.47e-01 | 77.2% | 8.3% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 41.0 | 4.18e-01 | 73.7% | 85.7% |
| 2ei0A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 40.0 | 2.96e-01 | 71.9% | 58.6% |
| 2p25A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 36.0 | 2.97e-01 | 78.9% | 30.3% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 40.0 | 2.79e-01 | 70.2% | 72.3% |
| 3ednA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.57 | 47.0 | 3.60e-01 | 94.7% | 50.0% |
| 3h6rA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 40.0 | 2.99e-01 | 77.2% | 39.5% |
| 7q04F01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.56 | 43.0 | 3.55e-01 | 86.0% | 93.6% |
| 3klqA01 | 2.60.40.3050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 45.0 | 3.68e-01 | 94.7% | 70.6% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.55 | 43.0 | 3.94e-01 | 91.2% | 91.3% |
| 2k4rA00 | 2.40.20.10 | Mainly Beta › Beta Barrel › Plasminogen Kringle 4 › Plasminogen Kringle 4 | 0.54 | 40.0 | 3.69e-01 | 89.5% | 59.7% |
| 2zylA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.54 | 43.0 | 3.35e-01 | 91.2% | 67.4% |
| 1r77A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 43.0 | 3.62e-01 | 87.7% | 81.8% |
| 3v0aB03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.19e-01 | 100.0% | 50.7% |
| 2oviA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.53 | 39.0 | 2.99e-01 | 84.2% | 86.1% |
| 2uurA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 3.07e-01 | 94.7% | 37.6% |
| 1i07A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 38.0 | 3.79e-01 | 75.4% | 83.1% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 36.0 | 3.09e-01 | 77.2% | 41.1% |
| 1kf6A04 | 4.10.80.40 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain | 0.52 | 29.0 | 3.28e-01 | 75.4% | 80.0% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 37.0 | 2.83e-01 | 78.9% | 63.2% |
| 5inwA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.52 | 35.0 | 2.95e-01 | 77.2% | 37.0% |
| 7szeB01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.52 | 39.0 | 3.31e-01 | 87.7% | 86.9% |
| 3mlqH00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 32.0 | 3.44e-01 | 73.7% | 81.0% |
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 35.0 | 3.40e-01 | 73.7% | 63.8% |
| 4fxdA05 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.51 | 36.0 | 2.94e-01 | 77.2% | 88.9% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 37.0 | 3.37e-01 | 84.2% | 66.3% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3479395 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.70 | 38.0 | 4.64e-01 | 70.2% | 90.9% |
| 3398908 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.69 | 47.0 | 4.47e-01 | 71.9% | 61.4% |
| 3883146 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.69 | 44.0 | 4.89e-01 | 70.2% | 84.4% |
| 4627769 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.67 | 45.0 | 3.90e-01 | 70.2% | 78.9% |
| 3585186 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.67 | 41.0 | 4.72e-01 | 73.7% | 100.0% |
| 4988890 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.67 | 45.0 | 3.83e-01 | 70.2% | 74.7% |
| 4554426 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.66 | 47.0 | 4.83e-01 | 77.2% | 87.0% |
| 3961965 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.66 | 46.0 | 4.47e-01 | 75.4% | 70.8% |
| 4588602 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.66 | 47.0 | 4.90e-01 | 77.2% | 96.0% |
| 5066776 | 221.1.2.20 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › Ribosomal_S4e | 0.66 | 46.0 | 3.65e-01 | 73.7% | 40.9% |
| 4966736 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.65 | 45.0 | 3.94e-01 | 71.9% | 54.1% |
| 3937472 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.65 | 51.0 | 4.23e-01 | 87.7% | 47.6% |
| 5036655 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 46.0 | 4.60e-01 | 77.2% | 85.0% |
| 2106030 | 221.1.2.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4,RS4NT | 0.64 | 46.0 | 3.67e-01 | 75.4% | 40.0% |
| 4681894 | 221.1.2.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › RS4NT | 0.64 | 46.0 | 3.70e-01 | 75.4% | 42.7% |
| 4889700 | 221.1.2.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4,RS4NT | 0.64 | 45.0 | 3.61e-01 | 75.4% | 41.0% |
| 4236690 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.63 | 44.0 | 4.11e-01 | 84.2% | 56.8% |
| 4179500 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.63 | 45.0 | 3.62e-01 | 73.7% | 42.7% |
| 4671179 | 221.1.2.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › RS4NT | 0.63 | 45.0 | 3.61e-01 | 77.2% | 40.8% |
| 3520872 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.63 | 51.0 | 4.66e-01 | 89.5% | 84.0% |
| 4932378 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 42.0 | 4.20e-01 | 71.9% | 76.7% |
| 3356654 | 221.1.2.20 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › Ribosomal_S4e | 0.61 | 42.0 | 4.35e-01 | 73.7% | 89.1% |
| 4114145 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 42.0 | 3.28e-01 | 77.2% | 63.8% |
| 4315771 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.57 | 39.0 | 3.76e-01 | 70.2% | 70.8% |
| 3192965 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.57 | 43.0 | 2.62e-01 | 91.2% | 12.1% |
| 3804385 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 37.0 | 3.70e-01 | 70.2% | 90.0% |
| 3405285 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.55 | 39.0 | 3.63e-01 | 78.9% | 82.5% |
| 3412753 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 40.0 | 2.46e-01 | 80.7% | 12.4% |
| 3792780 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.54 | 35.0 | 3.79e-01 | 70.2% | 92.5% |
| 3200380 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 41.0 | 3.77e-01 | 89.5% | 62.5% |
| 3591211 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 38.0 | 3.53e-01 | 78.9% | 76.2% |
| 3774579 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.53 | 37.0 | 3.01e-01 | 75.4% | 64.2% |
| 3605879 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.53 | 32.0 | 3.45e-01 | 75.4% | 71.1% |
| 3931292 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.53 | 35.0 | 3.78e-01 | 73.7% | 97.5% |
| 3738506 | 4325.1.1.4 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DIPSY | 0.53 | 34.0 | 3.80e-01 | 94.7% | 95.0% |
| 3909185 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.53 | 43.0 | 3.05e-01 | 94.7% | 38.0% |
| 5025218 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 38.0 | 2.35e-01 | 78.9% | 67.6% |
| 4032577 | 2002.1.1.52 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 | 0.53 | 39.0 | 2.55e-01 | 84.2% | 42.6% |
| 4032300 | 4.1.1.59 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_5 | 0.52 | 42.0 | 3.61e-01 | 87.7% | 95.6% |
| 3894532 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 41.0 | 2.97e-01 | 94.7% | 75.4% |
| 3583988 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.52 | 42.0 | 3.55e-01 | 98.2% | 85.5% |
| 4304579 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 36.0 | 3.53e-01 | 75.4% | 84.6% |
| 1557348 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.51 | 32.0 | 3.44e-01 | 73.7% | 81.0% |
| 4031542 | 66.1.1.2 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske_2 | 0.51 | 39.0 | 3.40e-01 | 89.5% | 84.8% |
| 3815957 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.51 | 42.0 | 2.67e-01 | 94.7% | 92.2% |
| 4170191 | 6.1.1.7 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › CDtoxinA | 0.51 | 36.0 | 2.70e-01 | 77.2% | 49.1% |
| 4832853 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 32.0 | 2.96e-01 | 75.4% | 46.7% |
| 3816490 | 1.1.1.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N | 0.50 | 40.0 | 2.51e-01 | 93.0% | 29.7% |
D2
high
residues 87-235
Domain cluster:
rep: OR545507.1__WNN14670.1__Sharanji_gp389__00382__D120-243