Back to structures

MH494197.1__AXC39389.1__X__00677

Bact-Vir

MH494197.1__AXC39389.1__X__00677

Identity

Accession:
MH494197 ↗
Kingdom:
phage

Quality

79.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 19-98
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bu2A02 3.30.1940.10 Alpha Beta › 2-Layer Sandwich › Nucleic acid-binding protein fold › YtpR-like 0.57 30.0 3.21e-01 78.8% 55.1%
1umzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.18e-01 90.0% 98.5%
1gbgA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 42.0 3.20e-01 86.3% 75.2%
4asmB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.07e-01 97.5% 59.9%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.54 44.0 3.15e-01 91.3% 56.3%
2od0A00 3.30.1460.30 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone 0.54 36.0 3.34e-01 70.0% 67.0%
1aukA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 36.0 3.43e-01 72.5% 73.2%
4m85C00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 42.0 3.15e-01 85.0% 97.3%
1mveA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 2.74e-01 78.8% 51.2%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 42.0 3.22e-01 95.0% 67.3%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4390515 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.63 41.0 3.24e-01 77.5% 33.1%
3709736 5.1.4.238 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 0.57 41.0 2.69e-01 76.2% 20.8%
4226766 3894.1.1.3 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M 0.57 50.0 4.31e-01 100.0% 79.2%
2631766 3894.1.1.1 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 0.56 49.0 4.27e-01 100.0% 84.1%
5059545 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 37.0 2.55e-01 71.2% 36.2%
3984133 3735.1.1.12 beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell 0.53 44.0 2.53e-01 96.2% 9.6%
3790115 5.1.4.341 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd 0.53 45.0 2.97e-01 98.8% 37.4%
3946113 241.7.1.1 a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N 0.53 35.0 3.28e-01 70.0% 65.7%
3522058 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 40.0 3.31e-01 83.7% 68.0%
3601135 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 42.0 2.81e-01 90.0% 47.4%
3579945 220.1.1.49 beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.52 40.0 3.31e-01 86.3% 63.2%
3980770 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.51 41.0 3.24e-01 100.0% 41.8%
4278661 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.51 42.0 3.18e-01 92.5% 63.8%
3791231 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 36.0 3.18e-01 73.8% 60.8%
5051533 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 36.0 3.21e-01 72.5% 70.9%
3789476 5.1.4.307 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29630 0.51 42.0 2.83e-01 97.5% 57.9%
3388090 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.51 43.0 2.98e-01 98.8% 57.7%
3567160 5.1.4.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.51 44.0 2.74e-01 98.8% 47.6%
3632947 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 42.0 2.88e-01 98.8% 63.7%
3868894 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.50 42.0 2.82e-01 98.8% 49.7%