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MH494197.1__AXC39406.1__X__00694

Bact-Vir

MH494197.1__AXC39406.1__X__00694

Identity

Accession:
MH494197 ↗
Kingdom:
phage

Quality

66.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Asteriusvirus› Escherichia_phage_CMSTMSU

TaxID: 2267248

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-49
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hdeC00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.79 49.0 3.32e-01 100.0% 17.7%
1s68A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.71 56.0 4.25e-01 88.9% 91.2%
4uopA01 3.30.1120.170 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.66 53.0 4.42e-01 100.0% 54.8%
1fc4A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.64 52.0 3.71e-01 91.1% 86.0%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.64 46.0 3.88e-01 77.8% 55.0%
2wtmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.61 51.0 3.30e-01 100.0% 37.2%
2qyvA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.59 51.0 3.19e-01 100.0% 71.1%
2kqrA01 3.30.1910.20 Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain 0.58 48.0 4.23e-01 100.0% 79.7%
5nmxB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 42.0 3.46e-01 84.4% 96.8%
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.57 41.0 4.20e-01 93.3% 92.5%
2lqoA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 37.0 3.06e-01 71.1% 93.2%
2i71A01 3.40.50.10640 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like 0.54 48.0 3.03e-01 97.8% 66.8%
3zpmA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.54 45.0 2.99e-01 100.0% 37.0%
7r71A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.53 32.0 2.87e-01 71.1% 39.1%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 36.0 3.52e-01 77.8% 82.1%
7wrgB01 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.52 43.0 2.61e-01 95.6% 98.8%
1w27A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.51 42.0 2.79e-01 100.0% 42.1%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 36.0 3.52e-01 80.0% 90.7%
7z8iC01 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.51 37.0 3.35e-01 95.6% 91.4%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4399119 331.3.1.8 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 0.69 57.0 4.28e-01 95.6% 76.7%
4880562 5.1.3.26 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.68 56.0 3.20e-01 93.3% 11.1%
3486720 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.65 44.0 2.58e-01 71.1% 31.0%
4934216 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.62 44.0 3.16e-01 75.6% 30.0%
3250267 109.4.1.791 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_17 0.60 40.0 2.59e-01 93.3% 13.8%
4319097 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 41.0 3.91e-01 77.8% 82.8%
3971603 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.59 44.0 2.77e-01 86.7% 21.4%
3244388 5001.1.1.106 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str 0.58 51.0 3.02e-01 97.8% 43.3%
3606601 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.58 47.0 2.73e-01 88.9% 20.1%
5072202 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.57 44.0 2.96e-01 86.7% 80.0%
3523886 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.57 45.0 3.70e-01 91.1% 72.7%
5076085 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.56 48.0 3.09e-01 95.6% 95.2%
2120488 7581.1.1.2 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ketoacyl-synt 0.56 50.0 2.91e-01 100.0% 41.5%
3585673 883.1.1.1 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.56 44.0 2.97e-01 97.8% 63.3%
4980170 7577.1.1.2 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 0.56 47.0 2.95e-01 97.8% 45.1%
4256769 65.1.1.0 ↗ beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.55 38.0 3.09e-01 73.3% 57.0%
3599685 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.55 45.0 2.64e-01 95.6% 53.2%
4028093 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 37.0 2.81e-01 84.4% 26.4%
4933113 101.1.9.150 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Cas12f1-like_TNB 0.54 42.0 3.22e-01 93.3% 35.5%
3930707 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.54 47.0 2.84e-01 100.0% 95.7%
3938642 1021.1.1.0 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.53 43.0 3.55e-01 88.9% 90.0%
5054668 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 38.0 3.88e-01 84.4% 84.4%
4934194 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.53 46.0 3.00e-01 97.8% 23.0%
2724208 7577.1.1.2 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 0.53 41.0 2.98e-01 91.1% 67.4%
4601962 4952.1.1.2 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_aromatic 0.51 42.0 2.72e-01 100.0% 42.0%
4220848 2484.1.1.103 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Tab2-like_N 0.51 46.0 2.84e-01 97.8% 18.7%
3623874 2.1.1.51 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 0.50 38.0 2.88e-01 91.1% 36.3%