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MH494197.1__AXC39409.1__X__00697
Bact-VirMH494197.1__AXC39409.1__X__00697
Identity
- Accession:
- MH494197 ↗
- Kingdom:
- phage
Quality
61.8
mean pLDDT
Taxonomy
TaxID: 2267248
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 41-97
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hh0A02 | 6.10.250.360 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.79 | 63.0 | 6.20e-01 | 87.7% | 85.5% |
| 2eh3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 53.0 | 4.12e-01 | 80.7% | 38.5% |
| 4r3aA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.65 | 53.0 | 3.75e-01 | 91.2% | 29.0% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.65 | 48.0 | 4.34e-01 | 80.7% | 63.0% |
| 1z21A00 | 1.10.10.1000 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain | 0.63 | 50.0 | 4.32e-01 | 93.0% | 54.2% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 54.0 | 4.37e-01 | 100.0% | 89.3% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.60 | 47.0 | 4.10e-01 | 87.7% | 64.0% |
| 5fgzA02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.60 | 51.0 | 3.72e-01 | 96.5% | 55.2% |
| 2rccA01 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.59 | 53.0 | 3.40e-01 | 100.0% | 22.0% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 43.0 | 4.19e-01 | 82.5% | 71.0% |
| 3rv0C02 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.58 | 51.0 | 3.82e-01 | 100.0% | 50.0% |
| 3umcD02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 43.0 | 3.92e-01 | 82.5% | 73.1% |
| 4myzC00 | 6.10.250.3430 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.57 | 39.0 | 4.11e-01 | 70.2% | 78.4% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.57 | 45.0 | 3.47e-01 | 91.2% | 65.7% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 42.0 | 4.32e-01 | 89.5% | 82.1% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.54 | 49.0 | 4.73e-01 | 100.0% | 96.9% |
| 2m4eA00 | 1.20.120.1930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family | 0.54 | 42.0 | 3.76e-01 | 89.5% | 64.0% |
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 42.0 | 3.75e-01 | 86.0% | 67.1% |
| 4v19K02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.53 | 36.0 | 3.32e-01 | 70.2% | 58.7% |
| 1e91A00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.51 | 39.0 | 3.50e-01 | 86.0% | 64.7% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3619140 | 142.1.1.5 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI | 0.81 | 63.0 | 5.27e-01 | 84.2% | 52.6% |
| 3637545 | 6108.1.1.11 ↗ | alpha bundles › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Dynamin_N | 0.80 | 67.0 | 3.85e-01 | 91.2% | 11.5% |
| 3214820 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.79 | 60.0 | 5.04e-01 | 80.7% | 55.9% |
| 4014048 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.75 | 64.0 | 5.14e-01 | 100.0% | 54.2% |
| 2063590 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.72 | 39.0 | 4.17e-01 | 93.0% | 60.0% |
| 3770225 | 6026.1.1.18 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › PF31011 | 0.70 | 57.0 | 5.50e-01 | 89.5% | 80.0% |
| 4003051 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.69 | 57.0 | 5.50e-01 | 89.5% | 81.5% |
| 4008705 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.69 | 55.0 | 4.46e-01 | 89.5% | 74.8% |
| 4947665 | 223.2.1.58 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Arf | 0.69 | 51.0 | 4.03e-01 | 78.9% | 38.3% |
| 4012603 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.69 | 51.0 | 4.78e-01 | 86.0% | 64.3% |
| 4666974 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.66 | 55.0 | 3.74e-01 | 91.2% | 27.4% |
| 3893232 | 4082.1.1.0 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain | 0.65 | 58.0 | 4.42e-01 | 96.5% | 48.3% |
| 4436090 | 108.1.1.99 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 | 0.63 | 48.0 | 4.09e-01 | 87.7% | 49.0% |
| 3780345 | 101.1.17.32 ↗ | alpha arrays › HTH › HTH › FF domain › LRR_LRWD1 | 0.62 | 49.0 | 3.53e-01 | 93.0% | 34.7% |
| 3584608 | 3660.1.1.3 ↗ | alpha bundles › Protein-export membrane protein secG › Protein-export membrane protein secG › Protein-export membrane protein secG › OPA1_C | 0.62 | 53.0 | 4.16e-01 | 93.0% | 100.0% |
| 3344229 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.62 | 43.0 | 4.14e-01 | 73.7% | 96.9% |
| 5043403 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.59 | 47.0 | 4.04e-01 | 93.0% | 86.0% |
| 3424167 | 3826.1.1.84 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF7797 | 0.58 | 51.0 | 4.56e-01 | 98.2% | 75.0% |
| 3637581 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.56 | 42.0 | 4.02e-01 | 91.2% | 69.6% |
| 4569385 | 377.1.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S14 | 0.52 | 37.0 | 3.28e-01 | 93.0% | 48.0% |