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MH494197.1__AXC39443.1__X__00731

Bact-Vir

MH494197.1__AXC39443.1__X__00731

Identity

Accession:
MH494197 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-109
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6vgwA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.52 33.0 2.79e-01 86.8% 35.5%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1758564 69.1.1.2 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.54 33.0 2.62e-01 93.4% 25.9%
3947082 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 37.0 3.55e-01 76.3% 87.8%
D2 high residues 125-195
PDB
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
152lA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.82 74.0 5.60e-01 100.0% 51.2%
5dsgA01 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.81 72.0 6.32e-01 100.0% 70.8%
4aqnA02 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.73 65.0 4.77e-01 100.0% 38.3%
1q5nA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.65 50.0 4.83e-01 85.9% 76.5%
1rj1A00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.64 50.0 4.03e-01 87.3% 66.2%
3bxjA02 1.10.506.20 Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › 0.60 47.0 4.27e-01 85.9% 71.4%
1sj8A02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.59 45.0 3.92e-01 87.3% 87.7%
4azcA02 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.56 39.0 4.23e-01 74.6% 98.3%
2pziB03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 41.0 3.36e-01 85.9% 84.0%
7t7kA01 1.20.930.60 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.52 39.0 3.47e-01 85.9% 98.3%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3838959 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.85 78.0 6.62e-01 100.0% 64.5%
156965 235.1.1.7 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme,Gp5_OB 0.85 77.0 5.35e-01 100.0% 37.0%
2665501 235.1.1.6 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme 0.84 77.0 5.64e-01 100.0% 47.2%
2439620 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.82 74.0 4.49e-01 100.0% 18.9%
2456732 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.82 74.0 6.17e-01 100.0% 70.0%
2524005 235.1.1.6 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme 0.82 73.0 5.48e-01 100.0% 48.3%
2099820 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.81 72.0 6.79e-01 100.0% 87.2%
975914 235.1.1.22 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Pesticin 0.73 65.0 4.77e-01 100.0% 38.1%
3830809 633.4.1.0 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor 0.66 52.0 4.39e-01 85.9% 75.0%
3607719 633.24.1.0 alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain 0.55 41.0 3.94e-01 83.1% 82.4%