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MH509441.1__AXH46827.1__SEA_ACOLYTE_84__00083
Bact-VirMH509441.1__AXH46827.1__SEA_ACOLYTE_84__00083
Identity
- Accession:
- MH509441 ↗
- Kingdom:
- phage
Quality
92.7
mean pLDDT
Taxonomy
TaxID: 2250290
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-65
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23794.2 best | Phage_Gp84 | 93.3 | 1.00e-26 | 100.0% | 95.5% |
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ejoB01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.72 | 62.0 | 5.64e-01 | 100.0% | 72.3% |
| 2x3lA01 | 3.90.1150.150 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.71 | 53.0 | 4.53e-01 | 81.2% | 70.5% |
| 2bopA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 40.0 | 3.61e-01 | 84.4% | 43.5% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.68 | 51.0 | 4.57e-01 | 81.2% | 98.9% |
| 3uaqB01 | 2.40.128.250 | Mainly Beta › Beta Barrel › Lipocalin › | 0.67 | 58.0 | 4.95e-01 | 100.0% | 92.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.67 | 49.0 | 3.67e-01 | 100.0% | 30.5% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.66 | 50.0 | 4.42e-01 | 82.8% | 97.9% |
| 1y9lA00 | 2.40.128.230 | Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM | 0.65 | 57.0 | 4.79e-01 | 100.0% | 99.1% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 50.0 | 3.85e-01 | 100.0% | 39.4% |
| 2r7kA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.63 | 42.0 | 4.32e-01 | 100.0% | 73.8% |
| 3nwpA00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 47.0 | 3.20e-01 | 81.2% | 97.9% |
| 5yrzB00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.62 | 41.0 | 4.27e-01 | 76.6% | 74.1% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 38.0 | 2.80e-01 | 100.0% | 26.2% |
| 3p8aA02 | 2.60.40.4320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 43.0 | 3.93e-01 | 89.1% | 57.8% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.58 | 48.0 | 4.31e-01 | 100.0% | 65.2% |
| 1smpI00 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 48.0 | 4.29e-01 | 98.4% | 88.0% |
| 4wh5A00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.58 | 49.0 | 3.77e-01 | 98.4% | 45.6% |
| 2mv2A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.57 | 46.0 | 3.64e-01 | 93.8% | 68.9% |
| 2pq0A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.56 | 50.0 | 4.23e-01 | 95.3% | 99.0% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 43.0 | 3.35e-01 | 90.6% | 95.2% |
| 2ww8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 3.73e-01 | 89.1% | 95.3% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.54 | 40.0 | 3.19e-01 | 81.2% | 72.1% |
| 3ujzA03 | 2.60.20.40 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › | 0.54 | 41.0 | 3.54e-01 | 81.2% | 85.0% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.54 | 40.0 | 3.97e-01 | 79.7% | 85.3% |
| 3ir9A02 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.54 | 43.0 | 3.56e-01 | 89.1% | 91.7% |
| 5chtB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.54 | 49.0 | 3.12e-01 | 100.0% | 24.3% |
| 4ehoB03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.54 | 42.0 | 3.18e-01 | 90.6% | 95.5% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.53 | 40.0 | 3.24e-01 | 87.5% | 92.2% |
| 3a8pB01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 46.0 | 3.85e-01 | 100.0% | 74.1% |
| 4q0jA03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.53 | 40.0 | 3.28e-01 | 87.5% | 98.6% |
| 1wgqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 45.0 | 3.89e-01 | 100.0% | 69.7% |
| 3gd0A01 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.53 | 45.0 | 3.11e-01 | 100.0% | 95.2% |
| 3fpwA01 | 3.30.450.150 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain | 0.52 | 48.0 | 3.79e-01 | 100.0% | 68.0% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.52 | 39.0 | 3.17e-01 | 82.8% | 78.8% |
| 2dm2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.36e-01 | 82.8% | 80.0% |
| 1tr0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 41.0 | 3.55e-01 | 89.1% | 83.0% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.52 | 38.0 | 3.83e-01 | 79.7% | 87.9% |
| 1dyqA02 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 44.0 | 3.48e-01 | 98.4% | 45.1% |
| 2zyqA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 42.0 | 3.49e-01 | 98.4% | 90.9% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.52 | 38.0 | 3.80e-01 | 78.1% | 92.2% |
| 3r7wC02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 37.0 | 3.26e-01 | 82.8% | 57.9% |
| 2qnuA00 | 3.40.1730.10 | Alpha Beta › 3-Layer(aba) Sandwich › pa0076 fold › pa0076 domain | 0.51 | 35.0 | 2.60e-01 | 76.6% | 53.1% |
| 1s4dE02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.50 | 39.0 | 3.14e-01 | 89.1% | 83.5% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.50 | 34.0 | 3.73e-01 | 100.0% | 93.9% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3716774 | 306.5.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP › PF28980 | 0.72 | 55.0 | 4.57e-01 | 82.8% | 92.2% |
| 3587556 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.69 | 58.0 | 5.64e-01 | 100.0% | 85.7% |
| 3314514 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.67 | 51.0 | 3.14e-01 | 82.8% | 68.8% |
| 3721580 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.66 | 42.0 | 2.73e-01 | 100.0% | 14.4% |
| 3779994 | 223.2.1.34 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 | 0.64 | 44.0 | 3.29e-01 | 71.9% | 38.2% |
| 3332079 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.63 | 51.0 | 3.17e-01 | 90.6% | 72.2% |
| 3166717 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.63 | 48.0 | 4.81e-01 | 89.1% | 83.1% |
| 3673272 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.62 | 46.0 | 2.89e-01 | 82.8% | 69.1% |
| 3378278 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.62 | 49.0 | 3.05e-01 | 90.6% | 74.5% |
| 4963846 | 2485.1.1.167 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › HTH_63 | 0.61 | 50.0 | 3.92e-01 | 90.6% | 91.4% |
| 4013690 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.61 | 45.0 | 4.76e-01 | 100.0% | 94.5% |
| 4950145 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.61 | 52.0 | 4.29e-01 | 100.0% | 92.7% |
| 3615237 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.60 | 47.0 | 2.98e-01 | 100.0% | 15.6% |
| 4950140 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.60 | 52.0 | 4.37e-01 | 100.0% | 98.3% |
| 4188110 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.59 | 46.0 | 4.58e-01 | 87.5% | 89.2% |
| 4136386 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.58 | 41.0 | 3.09e-01 | 75.0% | 57.6% |
| 4177964 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.58 | 41.0 | 3.76e-01 | 89.1% | 56.5% |
| 4995774 | 375.1.1.185 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 | 0.58 | 35.0 | 4.12e-01 | 95.3% | 97.5% |
| 4948951 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.58 | 49.0 | 4.08e-01 | 100.0% | 93.3% |
| 3335049 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.57 | 43.0 | 2.76e-01 | 85.9% | 78.9% |
| 4602886 | 221.3.1.0 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains | 0.57 | 45.0 | 4.40e-01 | 90.6% | 97.1% |
| 3624908 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.57 | 48.0 | 4.37e-01 | 100.0% | 75.6% |
| 3322497 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.56 | 42.0 | 3.93e-01 | 79.7% | 82.5% |
| 4948949 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.56 | 46.0 | 3.97e-01 | 93.8% | 100.0% |
| 3491836 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.55 | 47.0 | 4.66e-01 | 100.0% | 91.4% |
| 4126343 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.55 | 47.0 | 3.90e-01 | 100.0% | 63.3% |
| 3275705 | 3914.1.1.1 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin | 0.55 | 48.0 | 2.80e-01 | 100.0% | 16.2% |
| 3529782 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 47.0 | 3.96e-01 | 100.0% | 66.1% |
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.54 | 48.0 | 4.59e-01 | 100.0% | 94.7% |
| 4000519 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 45.0 | 4.05e-01 | 96.9% | 98.9% |
| 4147528 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.54 | 48.0 | 4.69e-01 | 100.0% | 98.6% |
| 3959440 | 4.1.1.180 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3107 | 0.54 | 47.0 | 4.76e-01 | 100.0% | 98.5% |
| 3945586 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.54 | 43.0 | 2.75e-01 | 85.9% | 50.8% |
| 5038746 | 872.1.1.2 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin | 0.54 | 39.0 | 3.84e-01 | 78.1% | 84.3% |
| 4532472 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 38.0 | 3.39e-01 | 78.1% | 100.0% |
| 3959955 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.53 | 36.0 | 3.88e-01 | 100.0% | 100.0% |
| 3496147 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.53 | 46.0 | 4.03e-01 | 100.0% | 73.0% |
| 3962617 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.53 | 43.0 | 3.15e-01 | 95.3% | 31.2% |
| 4999152 | 872.1.1.2 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin | 0.53 | 39.0 | 3.82e-01 | 79.7% | 84.1% |
| 5027350 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.53 | 42.0 | 3.30e-01 | 87.5% | 81.9% |
| 4010080 | 223.6.1.1 ↗ | a+b three layers › Profilin-like › GlcG-like › GlcG-like › HbpS-like | 0.52 | 48.0 | 3.72e-01 | 100.0% | 64.2% |
| 5054505 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 46.0 | 4.15e-01 | 100.0% | 95.6% |
| 4596042 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.52 | 42.0 | 3.21e-01 | 93.8% | 92.4% |
| 3969381 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.52 | 38.0 | 3.77e-01 | 79.7% | 82.9% |
| 5071539 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.51 | 38.0 | 3.71e-01 | 79.7% | 82.9% |
| 3929515 | 382.1.1.21 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › PF28966 | 0.51 | 43.0 | 3.79e-01 | 100.0% | 63.8% |
| 4929266 | 872.1.1.2 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin | 0.51 | 38.0 | 3.71e-01 | 79.7% | 82.9% |
| 5055700 | 872.1.1.2 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › Dodecin | 0.51 | 38.0 | 3.75e-01 | 81.2% | 84.3% |
| 3875549 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.51 | 42.0 | 3.09e-01 | 96.9% | 33.8% |
| 3700429 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.50 | 37.0 | 3.08e-01 | 85.9% | 52.9% |