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MH509447.1__AXH47326.1__SEA_EDEN_31__00031
Bact-VirMH509447.1__AXH47326.1__SEA_EDEN_31__00031
Identity
- Accession:
- MH509447 ↗
- Kingdom:
- phage
Quality
94.5
mean pLDDT
Taxonomy
TaxID: 2250289
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-94
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b7eA01 | 3.90.350.10 | Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 | 0.65 | 43.0 | 3.16e-01 | 87.9% | 25.2% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.60 | 44.0 | 3.63e-01 | 78.0% | 64.5% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 39.0 | 4.32e-01 | 82.4% | 87.1% |
| 4bs9A05 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 41.0 | 3.88e-01 | 80.2% | 59.6% |
| 3gd6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 48.0 | 4.15e-01 | 93.4% | 62.7% |
| 2ebkA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.57 | 40.0 | 3.60e-01 | 73.6% | 57.0% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.57 | 28.0 | 3.55e-01 | 83.5% | 85.4% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.57 | 45.0 | 3.96e-01 | 98.9% | 57.2% |
| 1iyxA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 49.0 | 4.48e-01 | 97.8% | 81.6% |
| 3f6gA02 | 3.30.160.340 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 37.0 | 4.21e-01 | 83.5% | 98.4% |
| 4dduA07 | 2.60.510.20 | Mainly Beta › Sandwich › EV matrix protein fold › | 0.55 | 39.0 | 3.75e-01 | 74.7% | 72.0% |
| 4mxtA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 37.0 | 2.98e-01 | 94.5% | 35.3% |
| 7x4oB01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 39.0 | 3.74e-01 | 81.3% | 97.3% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 38.0 | 4.09e-01 | 100.0% | 91.0% |
| 1dgsA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 36.0 | 3.96e-01 | 100.0% | 95.9% |
| 4aw8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 38.0 | 3.05e-01 | 81.3% | 92.5% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5010552 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.61 | 45.0 | 4.00e-01 | 76.9% | 60.8% |
| 3607863 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 41.0 | 4.10e-01 | 70.3% | 67.4% |
| 4629072 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 47.0 | 3.91e-01 | 83.5% | 68.8% |
| None | — | 0.60 | 45.0 | 3.35e-01 | 79.1% | 91.1% | |
| 3282536 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.60 | 42.0 | 4.50e-01 | 80.2% | 83.7% |
| 3700285 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.60 | 49.0 | 4.31e-01 | 89.0% | 82.2% |
| 5019134 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.59 | 37.0 | 3.10e-01 | 100.0% | 37.3% |
| 4993562 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 40.0 | 3.80e-01 | 78.0% | 59.0% |
| 3685453 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.59 | 53.0 | 4.09e-01 | 100.0% | 50.7% |
| 3693249 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.59 | 46.0 | 4.09e-01 | 83.5% | 83.8% |
| 3614844 | 220.1.1.15 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 | 0.59 | 45.0 | 3.83e-01 | 100.0% | 52.1% |
| 3758281 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.59 | 53.0 | 4.22e-01 | 100.0% | 55.6% |
| 3610972 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.57 | 46.0 | 4.12e-01 | 89.0% | 86.2% |
| 3927710 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 46.0 | 3.81e-01 | 89.0% | 73.9% |
| 5021851 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.56 | 43.0 | 3.00e-01 | 85.7% | 67.2% |
| 3591102 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.54 | 44.0 | 3.76e-01 | 89.0% | 90.0% |
| 3352475 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.54 | 38.0 | 4.10e-01 | 83.5% | 92.0% |
| 4105352 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.53 | 44.0 | 3.11e-01 | 90.1% | 71.9% |
| 3800293 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 29.0 | 2.95e-01 | 94.5% | 50.5% |
| 3236475 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 46.0 | 4.09e-01 | 98.9% | 93.3% |
| 2546240 | 5.1.3.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neuraminidase | 0.52 | 46.0 | 3.57e-01 | 100.0% | 49.5% |
| 377 | 2.1.1.90 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › ssDBP | 0.52 | 38.0 | 4.09e-01 | 100.0% | 91.0% |
| 4048745 | 2.1.1.26 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB | 0.51 | 38.0 | 3.82e-01 | 100.0% | 78.9% |
| 4971256 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.51 | 37.0 | 3.42e-01 | 78.0% | 64.0% |
| 3958888 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 42.0 | 3.57e-01 | 100.0% | 54.2% |
| 3784232 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.50 | 39.0 | 3.39e-01 | 84.6% | 77.9% |
| 3702735 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 39.0 | 2.34e-01 | 95.6% | 11.2% |