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MH518298.3__AWY03076.1__SCYZ1_3__00003
Bact-VirMH518298.3__AWY03076.1__SCYZ1_3__00003
Identity
- Accession:
- MH518298 ↗
- Kingdom:
- phage
Quality
91.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-59
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.63 | 54.0 | 4.42e-01 | 100.0% | 53.2% |
| 1nycA00 | 2.40.310.10 | Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors | 0.61 | 44.0 | 3.50e-01 | 76.4% | 41.4% |
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.59 | 51.0 | 4.75e-01 | 100.0% | 98.6% |
| 1wlgA02 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.58 | 46.0 | 3.53e-01 | 90.9% | 72.9% |
| 3ebkB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 49.0 | 3.61e-01 | 100.0% | 62.2% |
| 3zqsA02 | 3.10.110.20 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › RWD domain-like | 0.58 | 45.0 | 3.84e-01 | 89.1% | 72.4% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 43.0 | 4.54e-01 | 100.0% | 90.0% |
| 6j5cA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.57 | 50.0 | 4.39e-01 | 100.0% | 68.7% |
| 2x0qA01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.56 | 42.0 | 3.21e-01 | 87.3% | 33.8% |
| 3d79A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.56 | 40.0 | 3.70e-01 | 76.4% | 82.4% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 47.0 | 3.99e-01 | 100.0% | 56.2% |
| 3zleA03 | 2.10.70.70 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.55 | 33.0 | 3.73e-01 | 72.7% | 84.6% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 45.0 | 3.38e-01 | 94.5% | 76.0% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.54 | 39.0 | 4.05e-01 | 78.2% | 92.2% |
| 5fmgA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 40.0 | 2.69e-01 | 83.6% | 78.1% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 44.0 | 2.78e-01 | 100.0% | 85.0% |
| 3tu3B01 | 3.30.720.80 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.51 | 41.0 | 3.80e-01 | 96.4% | 73.7% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.50 | 34.0 | 3.41e-01 | 83.6% | 69.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3931541 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.70 | 55.0 | 4.73e-01 | 87.3% | 100.0% |
| 4143581 | 9.2.1.8 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › PF27487 | 0.65 | 55.0 | 4.29e-01 | 96.4% | 95.0% |
| 3503815 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 47.0 | 4.11e-01 | 100.0% | 54.1% |
| 3854862 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 43.0 | 3.72e-01 | 100.0% | 47.4% |
| 4945471 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 46.0 | 4.45e-01 | 98.2% | 89.2% |
| 4120506 | 243.11.1.4 ↗ | a+b two layers › Cystatin-like › NP_346341.1 protein › NP_346341.1 protein › PF29632 | 0.56 | 49.0 | 4.36e-01 | 100.0% | 68.8% |
| 3918299 | 4.1.1.376 ↗ | beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th | 0.56 | 45.0 | 4.30e-01 | 98.2% | 77.1% |
| 5017214 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 41.0 | 4.19e-01 | 100.0% | 90.9% |
| 3964889 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.54 | 46.0 | 4.20e-01 | 100.0% | 73.3% |
| 3266702 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 41.0 | 3.63e-01 | 92.7% | 63.4% |
| 3226078 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 37.0 | 3.69e-01 | 90.9% | 71.7% |
| 5055961 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.52 | 41.0 | 3.83e-01 | 100.0% | 75.0% |
| 3221321 | 207.1.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 | 0.51 | 41.0 | 2.82e-01 | 100.0% | 26.8% |
| 3785641 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 38.0 | 3.51e-01 | 83.6% | 62.7% |
| 5029643 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.50 | 41.0 | 3.76e-01 | 100.0% | 73.8% |
| 3782606 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.50 | 37.0 | 2.87e-01 | 85.5% | 55.9% |