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MH533020.1__AXN57901.1__X__00170
Bact-VirMH533020.1__AXN57901.1__X__00170
Identity
- Accession:
- MH533020 ↗
- Kingdom:
- phage
Quality
66.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-64
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.65 | 41.0 | 4.09e-01 | 83.3% | 58.6% |
| 1a99A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.65 | 54.0 | 3.89e-01 | 100.0% | 75.9% |
| 4pwuC00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 57.0 | 5.02e-01 | 100.0% | 96.2% |
| 3dlbA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.62 | 48.0 | 3.48e-01 | 90.7% | 82.9% |
| 3tqtA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.61 | 43.0 | 4.13e-01 | 98.1% | 63.2% |
| 3gidB02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.59 | 40.0 | 3.66e-01 | 98.1% | 49.4% |
| 3uxjA01 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.58 | 46.0 | 3.67e-01 | 90.7% | 72.0% |
| 2fepA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 49.0 | 3.70e-01 | 98.1% | 91.4% |
| 2asyA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 46.0 | 3.94e-01 | 100.0% | 84.2% |
| 1rlhA02 | 3.40.1520.10 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like | 0.55 | 47.0 | 3.93e-01 | 100.0% | 99.0% |
| 1gv4A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 38.0 | 2.80e-01 | 77.8% | 88.5% |
| 4lbhA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.53 | 45.0 | 3.82e-01 | 98.1% | 96.8% |
| 3k5iA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 36.0 | 3.44e-01 | 98.1% | 57.1% |
| 4u9cA01 | 2.40.128.250 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 43.0 | 3.39e-01 | 96.3% | 89.5% |
| 3e6qA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.52 | 42.0 | 3.34e-01 | 96.3% | 87.3% |
| 4q5tA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 38.0 | 3.03e-01 | 92.6% | 87.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4615915 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.58 | 46.0 | 3.29e-01 | 94.4% | 98.4% |
| 3277856 | 304.4.1.3 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › YCII | 0.56 | 47.0 | 3.77e-01 | 98.1% | 96.5% |
| 5040326 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.56 | 43.0 | 4.08e-01 | 87.0% | 95.4% |
| 4936518 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.55 | 47.0 | 4.23e-01 | 96.3% | 97.3% |
| 4992396 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.55 | 47.0 | 2.75e-01 | 100.0% | 12.6% |
| 3668379 | 4001.1.1.0 ↗ | a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins | 0.54 | 42.0 | 3.44e-01 | 87.0% | 81.9% |
| 3669972 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.51 | 40.0 | 3.22e-01 | 92.6% | 99.2% |
| 4026823 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 37.0 | 3.93e-01 | 98.1% | 100.0% |