Back to structures

MH533020.1__AXN57907.1__X__00176

Bact-Vir

MH533020.1__AXN57907.1__X__00176

Identity

Accession:
MH533020 ↗
Kingdom:
phage

Quality

92.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-70
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07486.18 best Hydrolase_2 41.0 3.90e-10 94.3% 50.0%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4f55A01 1.10.10.2520 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Cell wall hydrolase SleB, domain 1 0.79 60.0 5.79e-01 100.0% 71.2%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.56 36.0 3.38e-01 85.7% 52.3%
2fu2A00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.56 34.0 3.31e-01 94.3% 55.1%
2af0A02 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.53 32.0 3.08e-01 70.0% 51.2%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
185732 3374.1.1.2 a+b complex topology › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › Hydrolase_2 0.76 61.0 4.95e-01 100.0% 47.7%
3614389 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.58 48.0 3.21e-01 90.0% 26.0%
3654549 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 37.0 3.32e-01 91.4% 50.0%
3664997 1128.1.1.9 alpha bundles › LYR protein › LYR protein › LYR protein › LYRM_2 0.53 40.0 3.83e-01 85.7% 71.2%
3613828 109.54.1.1 alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 0.51 39.0 3.04e-01 91.4% 35.4%
3961645 6056.1.1.2 alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N 0.51 35.0 3.51e-01 75.7% 69.3%