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MH536814.1__AXH49362.1__SEA_BLUEEYEDBEAUTY_255__00218

Bact-Vir

MH536814.1__AXH49362.1__SEA_BLUEEYEDBEAUTY_255__00218

Identity

Accession:
MH536814 ↗
Kingdom:
phage

Quality

71.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-55
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wyhB04 1.20.1270.50 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain 0.77 67.0 5.52e-01 100.0% 58.4%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.74 53.0 5.16e-01 89.1% 67.7%
5figA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.66 58.0 4.79e-01 100.0% 55.0%
2zb9A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 48.0 5.06e-01 90.9% 94.0%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.56 51.0 4.72e-01 100.0% 98.5%
2ds2D01 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.56 39.0 3.91e-01 76.4% 71.9%
3u62A01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.56 35.0 2.75e-01 80.0% 27.2%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3936188 109.4.1.32 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G 0.78 67.0 3.84e-01 94.5% 10.1%
4432304 3390.1.1.0 extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT 0.77 61.0 6.37e-01 87.3% 100.0%
4076265 3390.1.1.0 extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT 0.74 59.0 6.13e-01 98.2% 100.0%
3833803 2003.1.5.115 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 0.71 60.0 3.64e-01 100.0% 14.7%
4988301 3877.1.1.0 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.71 63.0 4.58e-01 100.0% 40.0%
4009505 7079.1.1.1 a+b complex topology › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Caudo_TAP 0.71 59.0 5.51e-01 94.5% 84.3%
3614837 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 58.0 3.73e-01 94.5% 22.4%
4983736 4952.1.1.0 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.68 54.0 4.60e-01 94.5% 52.6%
3975557 3782.1.1.0 a+b duplicates or obligate multimers › Envelope glycoprotein GP2-related › Envelope glycoprotein GP2-related › Envelope glycoprotein GP2-related 0.64 52.0 5.05e-01 98.2% 100.0%
4478129 166.1.1.1 alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.61 46.0 3.87e-01 80.0% 48.9%