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MH540083.1__AXF42063.1__STIP37_1__00001
Bact-VirMH540083.1__AXF42063.1__STIP37_1__00001
Identity
- Accession:
- MH540083 ↗
- Kingdom:
- phage
Quality
89.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Igirivirus›
Synechococcus_T7-like_phage_S-TIP37
TaxID: 1332145
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-72
Domain cluster:
rep: HQ317388.1__AGG91270.1__SWVG_00030__00028__D13-72
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gprA00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.54 | 46.0 | 3.65e-01 | 97.2% | 49.4% |
| 4nsxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 39.0 | 2.53e-01 | 100.0% | 17.4% |
| 2d5wA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.52 | 35.0 | 2.98e-01 | 70.4% | 76.1% |
| 2hp7A00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.51 | 40.0 | 3.09e-01 | 90.1% | 65.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4245376 | 3933.1.1.1 ↗ | a+b two layers › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › KTSC | 0.79 | 58.0 | 6.21e-01 | 90.1% | 91.7% |
| 1489664 | 3933.1.1.1 ↗ | a+b two layers › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › KTSC | 0.79 | 58.0 | 5.93e-01 | 93.0% | 80.0% |
| 4952218 | 3933.1.1.1 ↗ | a+b two layers › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › KTSC | 0.78 | 57.0 | 6.10e-01 | 90.1% | 91.7% |
| 4501642 | 3933.1.1.1 ↗ | a+b two layers › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › KTSC | 0.76 | 56.0 | 5.68e-01 | 90.1% | 80.0% |
| 4973393 | 3933.1.1.1 ↗ | a+b two layers › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › KTSC | 0.69 | 54.0 | 5.36e-01 | 90.1% | 82.7% |
| 4933001 | 3933.1.1.0 ↗ | a+b two layers › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 | 0.65 | 47.0 | 4.65e-01 | 85.9% | 72.0% |
| 4079870 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.60 | 44.0 | 2.87e-01 | 78.9% | 42.8% |
| 3938992 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.60 | 50.0 | 3.31e-01 | 97.2% | 31.7% |
| 3614378 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 37.0 | 2.54e-01 | 76.1% | 22.5% |
| 4682851 | 2484.1.1.16 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_HII | 0.51 | 41.0 | 3.07e-01 | 97.2% | 55.5% |
| 3973712 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.50 | 43.0 | 3.18e-01 | 98.6% | 51.3% |