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MH553517.1__AXH50936.1__CPT_Scapp_007__00007

Bact-Vir

MH553517.1__AXH50936.1__CPT_Scapp_007__00007

Identity

Accession:
MH553517 ↗
Kingdom:
phage

Quality

81.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Scappvirus› Serratia_phage_Scapp

TaxID: 2282409

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-55
PDB
Domain cluster: representative
CATH (84)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bkyX00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.76 53.0 4.28e-01 75.0% 76.7%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.75 62.0 4.29e-01 97.7% 86.3%
2vqeE01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.71 56.0 5.14e-01 95.5% 79.7%
3mcrA00 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.70 57.0 4.05e-01 100.0% 39.0%
2xzmE01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.70 57.0 4.37e-01 100.0% 56.9%
3kf8A00 2.40.50.1040 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 56.0 3.73e-01 100.0% 44.0%
4cgyA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.69 58.0 4.24e-01 100.0% 75.0%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 56.0 4.32e-01 100.0% 84.3%
4e2xA01 6.20.50.110 Special › Other non-globular › N-terminal domain of TfIIb › Methyltransferase, zinc-binding domain 0.69 53.0 5.05e-01 88.6% 98.1%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 57.0 4.34e-01 100.0% 67.6%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 4.35e-01 100.0% 41.7%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.67 54.0 4.08e-01 95.5% 75.0%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.67 52.0 3.34e-01 95.5% 53.1%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.67 54.0 4.40e-01 93.2% 64.4%
2gaiA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.67 54.0 4.12e-01 100.0% 51.2%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.66 53.0 3.86e-01 95.5% 34.5%
4p2iA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.66 54.0 4.14e-01 100.0% 80.3%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 54.0 4.28e-01 100.0% 70.9%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.66 51.0 3.59e-01 88.6% 31.5%
2bbhA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.65 53.0 3.73e-01 95.5% 58.9%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 4.86e-01 100.0% 65.2%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.64 45.0 4.57e-01 84.1% 75.0%
4czuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 55.0 4.33e-01 97.7% 82.6%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 51.0 3.73e-01 95.5% 64.9%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 49.0 3.35e-01 86.4% 29.9%
1cjxB02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.64 50.0 3.31e-01 95.5% 20.3%
2z13A00 2.30.29.170 Mainly Beta › Roll › PH-domain like › 0.63 50.0 3.67e-01 86.4% 35.9%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 50.0 3.76e-01 95.5% 65.1%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 52.0 4.21e-01 100.0% 78.1%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 49.0 3.76e-01 95.5% 74.8%
3qz4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 48.0 3.01e-01 95.5% 17.0%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.63 45.0 3.18e-01 79.5% 37.7%
2y7jA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 53.0 4.21e-01 97.7% 94.4%
2ok5A02 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 47.0 3.05e-01 86.4% 29.7%
3ddmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 51.0 3.79e-01 100.0% 85.6%
2pgeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 47.0 3.53e-01 90.9% 90.6%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.61 50.0 3.37e-01 97.7% 84.1%
3ro6C01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 51.0 3.99e-01 100.0% 89.6%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 51.0 4.38e-01 100.0% 70.7%
2i4kA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.61 47.0 3.59e-01 95.5% 96.9%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 49.0 3.75e-01 93.2% 38.8%
3obqA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.61 50.0 3.55e-01 95.5% 34.0%
5b55A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 47.0 3.10e-01 86.4% 85.8%
1qs8A01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.60 40.0 2.72e-01 86.4% 17.1%
1jmxB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 48.0 2.95e-01 97.7% 17.1%
7mwzD01 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.60 45.0 3.22e-01 95.5% 26.1%
3qt2A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 3.57e-01 93.2% 73.5%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 48.0 3.58e-01 88.6% 41.2%
2fggA01 3.30.160.240 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 0.59 43.0 3.79e-01 84.1% 72.0%
6kmoB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 47.0 2.82e-01 90.9% 74.1%
3ga2A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.59 45.0 2.99e-01 93.2% 27.5%
3htnB00 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.59 45.0 3.45e-01 100.0% 32.4%
3bxpB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 44.0 2.76e-01 86.4% 26.3%
1ocsA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 45.0 3.38e-01 93.2% 37.1%
1yqzA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.58 45.0 3.60e-01 95.5% 46.3%
1x05A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 46.0 3.45e-01 95.5% 37.2%
4bqqB02 3.90.1750.20 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 0.58 44.0 2.99e-01 88.6% 70.5%
3g8zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 49.0 3.57e-01 100.0% 59.4%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 47.0 3.01e-01 100.0% 20.2%
7c5yA02 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 48.0 3.38e-01 100.0% 42.5%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.57 46.0 3.58e-01 100.0% 46.9%
1cyyA02 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.57 44.0 3.43e-01 100.0% 81.6%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.57 42.0 3.91e-01 81.8% 63.2%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 3.72e-01 100.0% 48.5%
3cgbA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 45.0 3.53e-01 97.7% 47.3%
4c89C00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 42.0 2.56e-01 88.6% 74.0%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.56 43.0 3.78e-01 88.6% 63.4%
1erzA00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.56 43.0 2.63e-01 88.6% 54.8%
1q42A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 45.0 3.15e-01 95.5% 47.8%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 43.0 3.90e-01 97.7% 78.9%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.55 40.0 2.43e-01 90.9% 9.9%
2g2sA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.55 40.0 3.66e-01 84.1% 57.8%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 2.85e-01 81.8% 29.2%
3fgyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 47.0 3.38e-01 100.0% 57.0%
1pn2B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 3.04e-01 93.2% 83.1%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.54 40.0 3.62e-01 81.8% 55.4%
2kxgA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 46.0 3.65e-01 97.7% 64.2%
1qlmA02 3.30.1030.10 Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 0.54 41.0 2.78e-01 90.9% 40.4%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 41.0 3.67e-01 95.5% 83.8%
6bjqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 3.51e-01 95.5% 90.9%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.53 42.0 3.35e-01 100.0% 47.8%
3kspA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 43.0 3.19e-01 100.0% 51.2%
4mp8A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.52 38.0 2.83e-01 95.5% 44.7%
2q22A00 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 40.0 3.05e-01 100.0% 96.9%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5076310 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.83 70.0 4.72e-01 95.5% 54.2%
3520847 243.5.1.0 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.80 67.0 5.50e-01 95.5% 58.7%
4995179 236.3.1.1 ↗ beta barrels › GroES-like › AF1531-like › AF1531-like › DUF655 0.77 67.0 5.43e-01 100.0% 76.5%
3398404 220.1.1.42 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › INPP5B_PH 0.76 66.0 4.64e-01 100.0% 37.1%
3993718 3256.1.1.0 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.76 62.0 5.30e-01 95.5% 62.7%
3814463 243.5.1.0 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.76 62.0 5.28e-01 95.5% 57.3%
4602887 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 66.0 5.63e-01 100.0% 89.2%
5049324 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 66.0 4.93e-01 100.0% 87.3%
3742215 2.1.1.44 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.75 66.0 5.21e-01 100.0% 82.2%
5018717 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.75 62.0 5.82e-01 95.5% 90.9%
3988703 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.75 63.0 5.58e-01 95.5% 64.6%
3619212 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.75 61.0 3.68e-01 95.5% 27.1%
4985567 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 65.0 5.07e-01 100.0% 78.9%
4640527 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.73 60.0 4.40e-01 95.5% 43.2%
4971602 316.1.1.45 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF4269 0.73 59.0 4.18e-01 95.5% 57.4%
4971710 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.73 63.0 3.77e-01 100.0% 44.8%
5077163 504.1.1.0 ↗ a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.73 60.0 4.29e-01 95.5% 54.1%
4943159 330.1.1.21 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5_C 0.72 60.0 4.68e-01 100.0% 54.3%
4282507 3274.1.1.1 ↗ extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 0.72 60.0 4.52e-01 100.0% 50.8%
5018714 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.72 60.0 5.47e-01 95.5% 81.7%
5031992 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.72 57.0 4.02e-01 95.5% 54.8%
3738197 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.71 57.0 3.95e-01 93.2% 67.3%
3478366 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.71 60.0 4.65e-01 100.0% 81.0%
3863194 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.71 57.0 4.20e-01 95.5% 70.8%
4931409 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 60.0 4.33e-01 97.7% 72.3%
4968170 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 60.0 4.61e-01 100.0% 70.5%
5019817 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 60.0 4.55e-01 100.0% 68.2%
5059673 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 61.0 4.72e-01 100.0% 89.0%
5033499 2.1.1.111 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.71 59.0 4.58e-01 100.0% 84.8%
3261477 330.1.1.2 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 0.70 57.0 4.60e-01 97.7% 55.8%
4289288 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.70 59.0 4.30e-01 97.7% 43.8%
5068666 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 59.0 4.50e-01 100.0% 81.8%
3780755 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.70 58.0 3.79e-01 100.0% 25.0%
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.70 59.0 4.95e-01 100.0% 57.5%
5033080 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 57.0 4.56e-01 95.5% 94.7%
4030728 5.1.4.661 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.69 56.0 3.28e-01 93.2% 11.8%
3583745 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 56.0 3.97e-01 95.5% 71.7%
5036880 330.1.1.35 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › LeuA_dimer 0.69 58.0 5.04e-01 97.7% 84.3%
5003644 264.2.1.1 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.69 56.0 4.21e-01 100.0% 76.0%
3224728 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 57.0 4.33e-01 100.0% 73.9%
4878112 3274.1.1.1 ↗ extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 0.68 56.0 4.41e-01 100.0% 47.6%
5066760 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.68 56.0 4.10e-01 95.5% 42.7%
145843 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.68 56.0 4.35e-01 100.0% 41.7%
5080083 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.68 57.0 4.26e-01 100.0% 79.2%
3711119 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.67 51.0 3.81e-01 84.1% 34.8%
3233399 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.67 52.0 4.29e-01 95.5% 44.2%
4510000 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.67 54.0 4.13e-01 95.5% 51.8%
3685150 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.67 55.0 3.78e-01 97.7% 33.3%
4169235 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.66 55.0 4.07e-01 97.7% 46.3%
3965319 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.66 54.0 4.11e-01 97.7% 47.0%
4124320 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.66 55.0 3.93e-01 95.5% 80.8%
5014602 504.1.1.0 ↗ a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.66 54.0 3.95e-01 95.5% 56.2%
4931072 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.66 55.0 4.83e-01 97.7% 68.6%
3456692 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.65 56.0 5.09e-01 95.5% 72.9%
3462235 243.3.1.19 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.65 58.0 4.73e-01 100.0% 71.2%
4802890 3274.1.1.0 ↗ extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) 0.65 46.0 3.69e-01 77.3% 38.0%
4043451 3826.1.1.22 ↗ alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › UPF0236 0.64 49.0 3.35e-01 95.5% 22.1%
3435224 243.3.1.19 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.64 56.0 4.87e-01 97.7% 76.9%
3747453 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.63 51.0 3.69e-01 95.5% 62.1%
4255362 3826.1.1.22 ↗ alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › UPF0236 0.63 50.0 3.74e-01 95.5% 31.9%
5041400 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 50.0 4.98e-01 95.5% 91.1%
3554073 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.63 51.0 3.81e-01 100.0% 67.7%
3499841 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 49.0 4.09e-01 97.7% 63.3%
4977218 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.62 50.0 3.05e-01 95.5% 24.6%
4946877 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.62 49.0 2.95e-01 90.9% 21.8%
4405445 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 49.0 4.37e-01 95.5% 71.4%
3832543 7516.1.1.41 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glucan_synthase 0.61 48.0 2.57e-01 86.4% 4.7%
3903091 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.61 48.0 2.86e-01 95.5% 24.6%
4262943 220.1.1.184 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.61 51.0 3.80e-01 100.0% 50.4%
3179468 330.1.1.18 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 0.61 46.0 3.28e-01 90.9% 43.1%
3911618 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.61 48.0 3.37e-01 100.0% 61.1%
3651210 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 49.0 4.49e-01 95.5% 73.3%
4493573 4964.1.1.2 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.60 48.0 3.28e-01 100.0% 44.0%
4002087 3698.1.1.1 ↗ beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT5_C 0.60 46.0 3.31e-01 93.2% 26.9%
4771028 271.1.1.1 ↗ beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.60 44.0 3.97e-01 81.8% 57.1%
5018575 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 47.0 3.72e-01 100.0% 62.6%
3315173 243.3.1.46 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SWIM 0.60 48.0 3.64e-01 95.5% 58.3%
3504139 209.1.1.0 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.59 46.0 3.25e-01 97.7% 48.2%
3518995 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 44.0 3.21e-01 100.0% 42.3%
3757490 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.58 48.0 3.86e-01 97.7% 67.4%
3816322 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.58 45.0 2.68e-01 86.4% 11.3%
4976136 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.57 41.0 3.46e-01 86.4% 38.9%
4797813 271.1.1.1 ↗ beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.57 42.0 3.91e-01 81.8% 63.2%
3601880 220.1.1.15 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 0.57 45.0 3.45e-01 100.0% 90.0%
4982831 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.57 43.0 2.55e-01 95.5% 9.9%
3253267 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 49.0 3.98e-01 100.0% 94.1%
3898198 220.1.1.184 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.56 46.0 3.47e-01 100.0% 58.4%
3942790 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.56 41.0 3.80e-01 90.9% 60.0%
3387224 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.56 42.0 3.24e-01 93.2% 54.6%
3370941 295.1.1.35 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FBA_1 0.56 42.0 2.93e-01 88.6% 53.9%
3526525 5.1.3.161 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_6 0.55 41.0 2.53e-01 86.4% 24.5%
2490256 271.1.1.1 ↗ beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.54 40.0 3.61e-01 81.8% 54.5%
3706802 5.1.3.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 0.54 46.0 2.73e-01 97.7% 24.4%
4770305 271.1.1.1 ↗ beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.53 39.0 3.57e-01 81.8% 56.2%
3928293 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 41.0 3.30e-01 97.7% 65.2%
3887780 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.52 44.0 2.63e-01 97.7% 20.6%
5032277 1.1.1.8 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.51 39.0 3.04e-01 95.5% 37.6%
5005555 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.50 36.0 2.31e-01 88.6% 25.3%