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MH553517.1__AXH50987.1__CPT_Scapp_058__00058

Bact-Vir

MH553517.1__AXH50987.1__CPT_Scapp_058__00058

Identity

Accession:
MH553517 ↗
Kingdom:
phage

Quality

77.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Scappvirus› Serratia_phage_Scapp

TaxID: 2282409

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 718-837
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03288.23 best Pox_D5 27.6 4.60e-06 77.5% 63.9%
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ka8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 67.0 7.29e-01 95.0% 97.0%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 39.0 4.11e-01 77.5% 58.0%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 38.0 4.33e-01 77.5% 71.4%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 36.0 4.42e-01 77.5% 80.5%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 40.0 4.14e-01 77.5% 61.4%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.68 42.0 5.00e-01 76.7% 93.8%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 37.0 4.67e-01 77.5% 92.8%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 36.0 3.83e-01 77.5% 58.7%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 36.0 4.59e-01 77.5% 96.9%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 33.0 4.41e-01 77.5% 98.3%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 37.0 4.01e-01 79.2% 66.0%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 35.0 4.08e-01 76.7% 72.4%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 37.0 4.08e-01 80.8% 70.4%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 35.0 4.29e-01 77.5% 86.7%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 38.0 4.08e-01 79.2% 68.6%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 41.0 4.33e-01 80.8% 76.2%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.62 34.0 4.19e-01 77.5% 90.0%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.60 38.0 3.69e-01 78.3% 55.1%
1u5tB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 40.0 4.64e-01 77.5% 95.3%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 37.0 4.28e-01 80.8% 85.1%
3sqnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 31.0 4.04e-01 75.8% 96.7%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 36.0 4.08e-01 82.5% 81.8%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 4.46e-01 95.8% 91.1%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 35.0 3.95e-01 80.8% 77.4%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 34.0 3.87e-01 83.3% 80.5%
4b09B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 37.0 4.00e-01 79.2% 80.6%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 33.0 3.63e-01 80.8% 69.3%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 35.0 4.06e-01 95.8% 91.8%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.54 27.0 3.33e-01 74.2% 74.7%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.90e-01 95.8% 79.0%
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 32.0 3.59e-01 76.7% 79.1%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 29.0 3.28e-01 76.7% 75.9%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942543 101.1.2.43 ↗ alpha arrays › HTH › HTH › winged helix domain › Pox_D5 0.85 67.0 6.97e-01 95.0% 88.2%
3537242 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.82 54.0 5.87e-01 81.7% 80.0%
3268629 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 42.0 5.16e-01 76.7% 97.1%
149637 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 39.0 4.11e-01 77.5% 58.0%
4953964 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 43.0 4.49e-01 77.5% 67.3%
5058268 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.69 39.0 3.99e-01 77.5% 57.4%
5049729 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 40.0 4.91e-01 76.7% 92.0%
4978789 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 43.0 4.78e-01 76.7% 78.9%
4947503 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 40.0 3.64e-01 77.5% 43.1%
5014384 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.68 39.0 4.01e-01 77.5% 58.3%
4983039 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 47.0 5.18e-01 81.7% 86.9%
3501315 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 37.0 4.07e-01 77.5% 64.0%
5054938 101.1.2.271 ↗ alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC 0.68 37.0 3.80e-01 77.5% 53.8%
4971494 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 37.0 3.81e-01 77.5% 54.8%
5080548 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 39.0 4.74e-01 75.8% 90.7%
4979651 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 36.0 4.13e-01 76.7% 70.0%
4944051 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 39.0 3.44e-01 77.5% 40.0%
3250041 101.1.2.525 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.66 41.0 3.27e-01 77.5% 32.4%
5050885 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 34.0 4.39e-01 76.7% 90.8%
4978424 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 41.0 4.13e-01 79.2% 61.7%
3657246 101.1.2.525 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.66 37.0 4.09e-01 77.5% 68.4%
5035685 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 43.0 4.25e-01 80.8% 63.7%
5079768 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 35.0 4.09e-01 77.5% 73.8%
5077919 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.65 37.0 4.03e-01 79.2% 67.0%
5075002 101.1.2.525 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.65 36.0 3.97e-01 77.5% 66.3%
4945099 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 40.0 3.99e-01 80.8% 59.2%
4950221 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.65 38.0 4.00e-01 79.2% 63.9%
3587554 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 39.0 4.30e-01 80.8% 73.0%
5078195 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 38.0 4.70e-01 72.5% 94.7%
5035522 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 38.0 4.04e-01 78.3% 66.7%
5072114 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 39.0 3.63e-01 79.2% 48.0%
3841412 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.63 39.0 4.04e-01 80.0% 64.3%
4028119 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 36.0 4.39e-01 76.7% 92.9%
4978596 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 41.0 4.06e-01 80.8% 62.4%
4625648 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 39.0 4.08e-01 77.5% 67.0%
4563894 101.1.2.55 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.63 35.0 4.05e-01 77.5% 75.3%
3587826 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 39.0 4.15e-01 79.2% 69.4%
3189296 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.63 44.0 3.99e-01 79.2% 53.0%
3938065 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 38.0 4.63e-01 77.5% 97.3%
4878879 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 39.0 4.17e-01 80.8% 72.4%
4996620 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 41.0 4.60e-01 76.7% 88.9%
5031473 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 40.0 4.25e-01 80.8% 74.3%
4998663 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 4.22e-01 83.3% 66.2%
3581762 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 38.0 4.09e-01 76.7% 71.4%
5082386 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 40.0 4.00e-01 80.8% 63.7%
2409292 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 39.0 4.18e-01 80.8% 74.0%
3988732 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 40.0 4.23e-01 80.8% 74.1%
5043001 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.60 32.0 3.45e-01 77.5% 56.2%
3936891 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 38.0 4.20e-01 76.7% 78.9%
4994660 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 45.0 4.74e-01 84.2% 85.5%
5005295 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.60 51.0 4.99e-01 90.0% 89.2%
3644266 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 37.0 4.06e-01 77.5% 75.0%
3240179 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 39.0 4.12e-01 76.7% 75.2%
5024966 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.59 37.0 3.49e-01 80.0% 51.7%
3739675 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.59 46.0 4.77e-01 98.3% 89.1%
4941846 101.1.2.55 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.58 33.0 3.95e-01 77.5% 86.7%
4940513 101.1.2.55 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.58 33.0 3.65e-01 76.7% 71.1%
4928190 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.58 33.0 3.79e-01 79.2% 77.4%
5071263 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 35.0 3.96e-01 80.8% 80.0%
3868765 101.1.2.178 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.56 38.0 4.19e-01 76.7% 88.4%
5041315 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.55 41.0 4.50e-01 85.8% 94.0%
4980206 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 32.0 3.80e-01 80.8% 85.0%
3376444 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.55 36.0 3.74e-01 80.8% 70.4%
4961487 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 40.0 4.08e-01 91.7% 80.9%
1299892 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.53 35.0 3.64e-01 81.7% 70.2%
4960288 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 42.0 3.67e-01 83.3% 60.6%
4991742 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 41.0 4.02e-01 93.3% 76.2%
4940345 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 45.0 4.35e-01 95.8% 88.9%
5001284 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 41.0 3.76e-01 84.2% 71.9%
5077851 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 41.0 3.84e-01 84.2% 72.7%
3627131 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 4.04e-01 79.2% 87.0%
5031662 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 43.0 4.26e-01 88.3% 94.4%
3785947 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.52 36.0 3.60e-01 76.7% 69.6%
4960260 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.51 28.0 3.51e-01 72.5% 91.4%
4995959 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 4.04e-01 97.5% 86.4%
4529153 327.19.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.50 26.0 3.22e-01 81.7% 81.4%
5053457 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.50 45.0 3.86e-01 100.0% 74.4%
D2 medium residues 1-81
PDB
Domain cluster: rep: MN746332.1__QNH91656.1__SR18_gp005c__00005__D13-91
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3501448 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 32.0 3.38e-01 100.0% 62.9%
3380329 376.1.1.120 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Vps39_C 0.54 27.0 3.04e-01 70.4% 61.7%
D3 medium residues 82-217
PDB
Domain cluster: rep: IMGVR_UViG_3300009647_000327-3300009647-Ga0123326_10058846__D83-238
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09250.17 best Prim-Pol 32.5 1.60e-07 82.3% 60.8%
D4 medium residues 343-489
PDB
Domain cluster: rep: OM732337.1__UNA02175.1__vBAmaSR9Y3_42__00042__D369-494
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08706.17 best D5_N 37.5 4.00e-09 74.8% 83.7%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.60 31.0 3.76e-01 74.1% 75.5%
4lgvA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 33.0 3.10e-01 85.7% 45.0%
2hszA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.55 29.0 3.89e-01 83.7% 100.0%
4l3uA00 1.20.1480.40 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 0.52 32.0 3.51e-01 70.1% 73.2%
1nw1A02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.52 43.0 3.52e-01 88.4% 85.1%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4931925 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 40.0 4.59e-01 81.0% 100.0%
3361 107.1.1.6 ↗ alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Dehyd-heme_bind 0.54 29.0 3.66e-01 75.5% 88.1%
3359 107.1.1.6 ↗ alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Dehyd-heme_bind 0.54 29.0 3.62e-01 75.5% 87.1%
3239629 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.52 44.0 4.35e-01 90.5% 89.0%
3735414 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.52 40.0 3.57e-01 79.6% 83.4%
3223918 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 41.0 4.13e-01 89.1% 87.6%
D5 medium residues 490-547_679-702
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z21A00 1.10.10.1000 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain 0.68 41.0 3.95e-01 85.4% 52.1%
D6 medium residues 548-678
PDB
Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19263.6 best DUF5906 43.9 4.90e-11 80.9% 94.7%