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MH576962.1__AXH66338.1__SEA_SATIS_179__00177

Bact-Vir

MH576962.1__AXH66338.1__SEA_SATIS_179__00177

Identity

Accession:
MH576962 ↗
Kingdom:
phage

Quality

81.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-80
PDB
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fnoA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 63.0 5.46e-01 97.3% 100.0%
4hsaF02 2.60.40.2150 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 0.70 55.0 4.92e-01 100.0% 59.0%
4kkpA02 2.60.40.3880 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 50.0 4.38e-01 100.0% 50.4%
6p3xB01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.67 52.0 3.97e-01 100.0% 35.6%
1hq6B00 3.50.20.10 Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B 0.66 55.0 4.03e-01 100.0% 31.6%
1uenA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 47.0 3.95e-01 100.0% 44.0%
4kwyA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.66 51.0 4.17e-01 83.8% 56.9%
2zaiA04 2.60.40.3030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 58.0 4.81e-01 100.0% 76.5%
3gv5B01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.65 56.0 4.67e-01 97.3% 87.9%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.64 47.0 4.10e-01 77.0% 55.0%
1e3hA03 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.64 49.0 3.53e-01 82.4% 52.1%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.63 56.0 4.90e-01 100.0% 86.6%
3q8pB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.63 52.0 4.61e-01 100.0% 62.0%
3b8mC01 3.30.1890.10 Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like 0.63 56.0 4.44e-01 100.0% 99.3%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.62 50.0 4.37e-01 100.0% 57.1%
2od6C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 55.0 4.89e-01 100.0% 97.2%
2zw2A00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.62 54.0 5.20e-01 98.6% 100.0%
7uzsX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 50.0 4.32e-01 100.0% 57.4%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 55.0 4.93e-01 100.0% 76.7%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.61 55.0 4.83e-01 100.0% 92.6%
3bc8A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 45.0 3.64e-01 79.7% 86.2%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 53.0 4.98e-01 98.6% 91.0%
3bn7A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 51.0 4.66e-01 98.6% 100.0%
2cuwA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.59 50.0 4.90e-01 98.6% 100.0%
3zjbA00 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.58 50.0 3.90e-01 100.0% 43.6%
4gwmB03 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.58 50.0 3.94e-01 100.0% 58.5%
3v2uC02 3.30.70.3170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 49.0 4.57e-01 95.9% 96.8%
1gpcA00 3.90.198.10 Alpha Beta › Alpha-Beta Complex › Replication Fork Single-Stranded DNA Binding Protein › Replication Fork Single-Stranded Dna Binding Protein 0.58 43.0 3.20e-01 83.8% 83.0%
4kgmA00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.57 52.0 3.63e-01 100.0% 58.7%
1x9tA02 3.90.1620.10 Alpha Beta › Alpha-Beta Complex › adenovirus 2 penton base, domain 2 › adenovirus 2 penton base, domain 2 0.57 49.0 3.35e-01 97.3% 43.6%
3b49A00 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.57 47.0 3.42e-01 90.5% 88.7%
3es6B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 45.0 3.93e-01 100.0% 55.9%
3kg0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 50.0 4.59e-01 100.0% 95.9%
2op5B01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 47.0 4.35e-01 98.6% 100.0%
5xgbA03 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.56 47.0 3.31e-01 94.6% 46.2%
6u7jA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 36.0 3.42e-01 100.0% 53.9%
5jtwB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 41.0 3.75e-01 100.0% 57.5%
5d4nC00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 48.0 4.40e-01 100.0% 91.8%
3ezuA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.55 47.0 3.84e-01 100.0% 70.9%
1mkfA02 2.60.40.1340 Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like 0.55 48.0 3.71e-01 100.0% 47.7%
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.54 40.0 2.90e-01 82.4% 31.9%
5dcaA08 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 43.0 3.80e-01 98.6% 58.2%
3e1uA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.54 45.0 3.55e-01 100.0% 53.3%
1h2cA00 2.70.20.20 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain 0.54 47.0 3.99e-01 100.0% 96.0%
2rilA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 46.0 4.33e-01 100.0% 95.8%
2f5gA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.53 45.0 3.86e-01 98.6% 73.8%
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.52 36.0 3.81e-01 100.0% 90.0%
7bv3A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 45.0 3.12e-01 98.6% 47.1%
2b9wA03 3.30.70.1990 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 43.0 4.09e-01 100.0% 98.9%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.03e-01 100.0% 46.2%
4a18X01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.50 44.0 4.35e-01 100.0% 92.4%
1nbwA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 43.0 3.60e-01 98.6% 82.6%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3213272 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.71 62.0 3.44e-01 97.3% 22.9%
3579398 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.70 49.0 4.52e-01 100.0% 56.8%
3914774 5067.1.1.3 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched 0.70 51.0 2.87e-01 77.0% 63.5%
4237265 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 56.0 4.92e-01 100.0% 59.1%
4011207 304.6.1.0 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain 0.68 61.0 4.06e-01 100.0% 36.2%
3560439 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.68 58.0 4.13e-01 97.3% 72.6%
4942869 303.1.1.1 a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC 0.67 51.0 3.96e-01 100.0% 36.5%
3586784 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.66 47.0 4.12e-01 100.0% 50.0%
3615884 11.1.1.1189 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › XRCC1_N 0.66 49.0 5.04e-01 100.0% 84.1%
3595936 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 61.0 3.84e-01 100.0% 30.6%
3931565 304.20.1.1 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind 0.65 55.0 4.57e-01 98.6% 90.0%
3898917 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 49.0 4.05e-01 100.0% 44.3%
3714678 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 49.0 3.09e-01 100.0% 14.6%
3413442 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.64 40.0 3.81e-01 100.0% 54.1%
4216863 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 49.0 4.71e-01 100.0% 74.1%
3882782 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.60 53.0 4.44e-01 100.0% 58.5%
3999001 10.7.1.0 beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.60 49.0 4.38e-01 100.0% 62.9%
3754279 11.1.1.239 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG3 0.60 48.0 4.16e-01 100.0% 55.0%
4014221 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.60 52.0 4.69e-01 100.0% 71.4%
3726266 3363.1.1.0 beta sandwiches › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs 0.59 52.0 4.94e-01 100.0% 94.4%
3729534 821.1.1.0 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.59 49.0 4.06e-01 100.0% 49.7%
3508212 3115.1.1.6 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 0.58 42.0 4.30e-01 100.0% 82.9%
3226049 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.58 48.0 3.96e-01 100.0% 49.0%
3768151 11.1.1.400 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M,A2M_BRD,MG4,MG3 0.57 50.0 3.01e-01 100.0% 13.5%
3879431 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 43.0 3.85e-01 100.0% 58.1%
4668962 303.1.1.0 a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases 0.56 49.0 3.72e-01 100.0% 85.3%
3582580 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 50.0 4.32e-01 100.0% 63.5%
4066969 303.1.1.1 a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC 0.56 47.0 3.63e-01 100.0% 38.4%
3702482 2492.1.1.34 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › LmjF365940-deam 0.56 44.0 3.40e-01 100.0% 36.1%
4003316 10.7.1.0 beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.56 50.0 4.21e-01 100.0% 80.0%
3934164 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.56 47.0 3.16e-01 100.0% 85.1%
3244886 312.1.1.17 a+b three layers › HIT-like › HIT-related › HIT-related › GalP_UDP_transf+GalP_UDP_tr_C 0.55 50.0 3.22e-01 100.0% 69.4%
4960940 11.1.1.50 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Calx-beta 0.55 44.0 3.88e-01 100.0% 57.4%
3406669 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 35.0 3.28e-01 100.0% 48.0%
3354676 10.9.1.1 beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › PPO1_KFDV 0.55 48.0 4.62e-01 98.6% 85.9%
3199216 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.54 46.0 3.71e-01 100.0% 83.1%
3382614 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 46.0 2.81e-01 100.0% 15.9%
3486745 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 46.0 3.77e-01 100.0% 51.9%
3307137 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 46.0 3.35e-01 100.0% 33.3%
3628791 3680.1.1.1 a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › SARA_C 0.53 44.0 3.60e-01 97.3% 73.5%
1030893 11.26.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Viral chemokine binding protein m3 › Viral chemokine binding protein m3 › M3 0.53 46.0 3.56e-01 100.0% 45.7%
3863736 11.10.1.5 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.52 45.0 3.46e-01 100.0% 40.6%
3800768 304.20.1.1 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind 0.52 45.0 3.71e-01 100.0% 80.7%
3927968 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.52 45.0 3.72e-01 100.0% 67.9%
3195252 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 46.0 3.55e-01 100.0% 67.6%
3623001 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.51 43.0 4.21e-01 97.3% 100.0%
1442666 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.50 44.0 4.31e-01 100.0% 90.1%
3723291 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.50 43.0 3.29e-01 100.0% 71.1%