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MH576965.1__AXH66852.1__SEA_STARPLATINUM_107__00103

Bact-Vir

MH576965.1__AXH66852.1__SEA_STARPLATINUM_107__00103

Identity

Accession:
MH576965 ↗
Kingdom:
phage

Quality

94.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stanwilliamsviridae› Karimacvirus› Streptomyces_phage_StarPlatinum

TaxID: 2283265

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-48
PDB
Domain cluster: representative
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.75 51.0 4.36e-01 70.5% 46.5%
2eobA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.75 58.0 4.44e-01 100.0% 35.4%
1rm6A03 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.74 50.0 3.58e-01 70.5% 31.1%
1nijA02 3.30.1220.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Yjia; Chain: A;domain 2 › CobW-like, C-terminal domain 0.74 62.0 4.63e-01 100.0% 37.1%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.74 52.0 4.56e-01 75.0% 63.1%
2dx0B01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.74 62.0 5.32e-01 100.0% 58.7%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.73 61.0 4.55e-01 100.0% 35.8%
4ywzB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.73 59.0 4.18e-01 95.5% 35.6%
2w3sB04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.72 49.0 3.19e-01 72.7% 22.7%
3ktnA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.72 61.0 3.63e-01 100.0% 14.4%
4q8gA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.71 61.0 3.58e-01 97.7% 81.4%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.70 56.0 3.73e-01 100.0% 21.0%
3wirA03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.70 61.0 5.28e-01 100.0% 68.1%
1s6lA02 3.15.10.60 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Alkylmercury lyase 0.70 57.0 4.16e-01 100.0% 32.6%
1vzyA01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.69 57.0 3.69e-01 100.0% 19.7%
6w9rB01 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.69 56.0 3.95e-01 100.0% 28.3%
4nurA03 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.68 57.0 4.15e-01 97.7% 34.4%
2bseA00 2.60.40.1830 Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain 0.68 58.0 4.41e-01 100.0% 66.4%
1c44A00 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.68 55.0 4.16e-01 100.0% 44.7%
2qkpD00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 56.0 4.07e-01 100.0% 44.8%
3hrgA02 3.30.420.260 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain 0.67 52.0 4.05e-01 100.0% 36.8%
1f98A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 58.0 4.20e-01 100.0% 36.8%
4dkkA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 45.0 3.84e-01 70.5% 45.9%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 44.0 3.87e-01 70.5% 48.6%
3obqA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.66 49.0 3.48e-01 81.8% 53.2%
4axhA03 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.66 55.0 4.07e-01 100.0% 35.2%
3a2eA00 3.30.430.20 Alpha Beta › 2-Layer Sandwich › Killer Toxin P4; Chain A › Gnk2 domain, C-X8-C-X2-C motif 0.64 53.0 4.14e-01 100.0% 74.1%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.64 48.0 3.63e-01 81.8% 34.6%
1k8iA01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.64 44.0 3.73e-01 72.7% 42.9%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.63 42.0 3.18e-01 70.5% 83.8%
1rf6A01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.61 46.0 3.04e-01 88.6% 29.0%
2ediA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.61 41.0 2.87e-01 72.7% 73.8%
1u0kA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.60 50.0 3.68e-01 100.0% 54.5%
2q03A00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.60 52.0 3.67e-01 97.7% 44.4%
1k8kA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.60 46.0 3.73e-01 88.6% 59.8%
1rtqA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.59 40.0 2.43e-01 70.5% 11.0%
1tkjA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.59 42.0 2.62e-01 79.5% 12.6%
2ltsA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 48.0 3.88e-01 93.2% 73.3%
1i5eA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 41.0 2.70e-01 77.3% 18.8%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 38.0 3.05e-01 70.5% 29.5%
5mypA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.57 39.0 2.47e-01 100.0% 11.9%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.57 38.0 2.99e-01 70.5% 37.2%
4ms4B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 45.0 3.15e-01 100.0% 26.1%
3if8B03 6.20.270.10 Special › Other non-globular › Carboxypeptidase Inhibitor; Chain A › 0.56 38.0 3.51e-01 72.7% 71.7%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.56 49.0 3.38e-01 100.0% 47.6%
3dxpA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 49.0 3.81e-01 100.0% 94.6%
6ci7A01 3.30.160.660 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 47.0 3.48e-01 100.0% 50.0%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.55 38.0 3.60e-01 75.0% 70.2%
1qlmA02 3.30.1030.10 Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 0.54 39.0 2.65e-01 81.8% 28.8%
1lkxC03 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.54 37.0 2.97e-01 77.3% 54.2%
5ucdA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.53 38.0 2.50e-01 79.5% 16.8%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 43.0 3.72e-01 95.5% 94.6%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.52 38.0 3.29e-01 95.5% 60.0%
4z1xA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 35.0 2.51e-01 70.5% 24.5%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.52 43.0 3.16e-01 100.0% 47.8%
4w91B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 35.0 2.46e-01 70.5% 24.6%
3es6B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.05e-01 95.5% 54.2%
2p0hA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.15e-01 95.5% 70.3%
1xfdA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 41.0 2.68e-01 100.0% 34.7%
4dmzA02 3.30.70.2880 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 38.0 2.92e-01 100.0% 88.3%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3598260 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 53.0 3.77e-01 70.5% 24.0%
3686792 263.1.1.0 ↗ a+b three layers › SRF-like › SRF-like › SRF-like 0.78 66.0 6.08e-01 100.0% 75.0%
4121524 304.125.1.1 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in Api92-like proteins › ferredoxin-like domain in Api92-like proteins › DUF1281_C 0.77 67.0 4.79e-01 100.0% 58.6%
3517153 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.75 51.0 4.17e-01 70.5% 38.7%
3722269 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.75 50.0 4.25e-01 70.5% 42.9%
4956579 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.75 50.0 3.36e-01 70.5% 41.2%
3277842 4187.1.1.1 ↗ a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB 0.75 62.0 5.64e-01 100.0% 70.0%
5041249 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.74 50.0 4.26e-01 70.5% 50.0%
3585833 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.74 49.0 3.69e-01 70.5% 29.1%
5791 295.1.1.6 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.73 61.0 4.56e-01 100.0% 36.1%
None — 0.73 64.0 4.03e-01 100.0% 20.6%
3299580 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.73 49.0 4.31e-01 70.5% 47.7%
3234330 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.73 48.0 3.55e-01 70.5% 27.3%
3209385 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.72 49.0 4.28e-01 70.5% 47.7%
4554843 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.72 61.0 4.49e-01 100.0% 43.2%
4196609 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.71 49.0 3.56e-01 72.7% 35.0%
4989110 884.1.1.1 ↗ a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C 0.71 60.0 5.02e-01 100.0% 55.0%
3369111 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.71 48.0 3.91e-01 70.5% 41.2%
4999643 268.1.1.1 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 0.71 59.0 4.29e-01 95.5% 39.5%
4644945 246.1.1.0 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase 0.70 60.0 3.83e-01 100.0% 19.6%
3993443 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.70 47.0 3.99e-01 70.5% 44.0%
5061935 7575.1.1.4 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 0.68 55.0 3.31e-01 100.0% 12.1%
4928954 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.68 46.0 3.29e-01 70.5% 55.4%
4018452 7579.1.1.36 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.68 46.0 2.78e-01 70.5% 23.7%
4827586 2003.1.5.151 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.67 55.0 3.48e-01 93.2% 20.4%
3633470 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.67 50.0 3.57e-01 81.8% 56.6%
3743072 3435.1.1.2 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N 0.67 51.0 3.60e-01 86.4% 51.0%
3263502 331.4.1.9 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.66 44.0 3.56e-01 70.5% 35.6%
3743864 109.4.1.1787 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup188_N-subdom_III 0.65 46.0 2.47e-01 77.3% 3.4%
3351889 3887.2.1.1 ↗ a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung 0.65 53.0 4.09e-01 100.0% 68.7%
3441742 3887.2.1.1 ↗ a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung 0.65 53.0 4.18e-01 100.0% 72.7%
2048355 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.65 53.0 3.98e-01 100.0% 54.7%
4243367 3561.1.1.0 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 0.65 49.0 2.87e-01 84.1% 33.1%
3401140 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.64 54.0 3.11e-01 100.0% 15.1%
3354935 3887.2.1.1 ↗ a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung 0.64 53.0 4.20e-01 100.0% 75.2%
3775033 3164.1.1.0 ↗ few secondary structure elements › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein 0.64 43.0 2.81e-01 70.5% 17.6%
3973107 286.1.1.0 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like 0.64 52.0 3.91e-01 100.0% 56.0%
3570970 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.63 44.0 2.91e-01 75.0% 19.5%
4002382 7525.1.1.2 ↗ a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 0.63 52.0 3.10e-01 90.9% 88.5%
3441744 3887.2.1.1 ↗ a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung 0.62 53.0 4.12e-01 100.0% 76.2%
5030958 2004.1.1.308 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.61 51.0 3.01e-01 97.7% 18.6%
3327260 3887.2.1.1 ↗ a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung 0.61 47.0 3.79e-01 100.0% 73.6%
3631697 286.1.1.0 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like 0.60 50.0 3.97e-01 97.7% 43.0%
3646024 3887.2.1.1 ↗ a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung 0.60 46.0 3.74e-01 100.0% 73.6%
5052993 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.59 47.0 3.18e-01 100.0% 51.2%
3884395 233.1.1.3 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_II_alpha 0.59 40.0 3.30e-01 72.7% 35.6%
3871823 2004.1.1.433 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.59 47.0 2.69e-01 100.0% 7.8%
5051650 268.1.1.1 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 0.58 48.0 3.51e-01 100.0% 39.1%
3399510 896.1.1.3 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.58 49.0 4.12e-01 95.5% 69.3%
3923911 896.1.1.3 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.58 48.0 4.08e-01 95.5% 69.3%
5064801 3281.1.1.1 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.57 44.0 2.61e-01 100.0% 52.1%
2167775 330.10.1.1 ↗ a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO 0.57 49.0 3.56e-01 100.0% 46.1%
5062328 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.57 40.0 2.52e-01 77.3% 50.9%
3599870 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.57 39.0 2.76e-01 72.7% 70.6%
3688137 268.1.1.0 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.57 45.0 3.34e-01 95.5% 33.3%
3652916 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.57 46.0 3.12e-01 97.7% 28.4%
3642585 331.4.1.2 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.56 48.0 3.45e-01 100.0% 55.4%
5083897 4312.1.1.1 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › BrnT_toxin 0.54 47.0 3.65e-01 100.0% 85.7%
3462190 3561.1.1.0 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 0.54 38.0 2.32e-01 81.8% 10.0%
4194046 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.54 45.0 3.02e-01 100.0% 31.1%
3441455 3887.2.1.1 ↗ a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung 0.53 41.0 3.38e-01 100.0% 69.5%
3683264 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.53 44.0 2.99e-01 100.0% 76.2%
3929586 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.53 40.0 3.90e-01 90.9% 76.0%
4591449 7556.1.1.1 ↗ a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C 0.52 41.0 2.47e-01 97.7% 80.9%
4185319 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.51 41.0 2.71e-01 93.2% 27.3%
4979632 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.51 35.0 2.46e-01 70.5% 51.7%
4023222 7556.1.1.0 ↗ a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase 0.51 39.0 2.45e-01 100.0% 65.9%
4460237 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.51 40.0 3.50e-01 93.2% 89.3%
5029252 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.51 41.0 3.04e-01 90.9% 67.5%
4019196 2011.1.1.8 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.51 42.0 2.58e-01 100.0% 30.5%
D2 medium residues 58-98
PDB
Domain cluster: representative