←Back to structures

MH576968.1__AXH67359.1__SEA_WOFFORD_220__00177

Bact-Vir

MH576968.1__AXH67359.1__SEA_WOFFORD_220__00177

Identity

Accession:
MH576968 ↗
Kingdom:
phage

Quality

92.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stanwilliamsviridae› Karimacvirus› Streptomyces_phage_Wofford

TaxID: 2283267

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-80
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 38.0 4.11e-01 88.6% 54.8%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 44.0 4.77e-01 100.0% 68.3%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.73 43.0 4.71e-01 100.0% 71.2%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 51.0 5.51e-01 100.0% 85.0%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.72 45.0 4.85e-01 100.0% 75.0%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 51.0 5.37e-01 100.0% 84.4%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 48.0 4.62e-01 100.0% 63.7%
1ug1A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 51.0 4.64e-01 100.0% 59.8%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 41.0 4.28e-01 100.0% 65.6%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 47.0 5.15e-01 100.0% 87.7%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 47.0 4.91e-01 100.0% 78.5%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 47.0 4.80e-01 100.0% 75.0%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.67 49.0 3.45e-01 100.0% 26.1%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 47.0 4.15e-01 100.0% 52.0%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 47.0 5.13e-01 100.0% 89.5%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 49.0 5.17e-01 100.0% 87.3%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 46.0 4.95e-01 100.0% 86.4%
2dlpA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 47.0 4.39e-01 100.0% 62.4%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 38.0 3.14e-01 100.0% 34.4%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.62 35.0 3.56e-01 100.0% 54.9%
5wceA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.59 43.0 3.62e-01 80.0% 86.8%
3c0iA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.57 42.0 3.02e-01 78.6% 33.3%
3is5F02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.54 38.0 2.94e-01 75.7% 38.5%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.53 39.0 3.79e-01 100.0% 71.1%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 41.0 2.96e-01 92.9% 82.0%
1tkeA03 3.30.54.20 Alpha Beta › 2-Layer Sandwich › Replication Terminator Protein; Chain A, domain 2 › 0.51 36.0 3.79e-01 80.0% 91.4%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4526160 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.84 46.0 5.86e-01 100.0% 95.0%
3901202 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.81 40.0 5.22e-01 88.6% 85.0%
5068036 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.74 36.0 4.32e-01 85.7% 71.1%
3876823 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 50.0 4.89e-01 100.0% 68.0%
3217113 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 50.0 5.17e-01 100.0% 78.5%
3599257 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 50.0 5.23e-01 100.0% 80.0%
3778124 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 48.0 5.06e-01 100.0% 76.9%
3747208 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 49.0 4.71e-01 100.0% 63.7%
3523046 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 48.0 4.51e-01 100.0% 58.8%
3623786 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 48.0 5.05e-01 100.0% 76.9%
3231675 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 51.0 5.12e-01 100.0% 75.7%
3573775 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 49.0 5.12e-01 100.0% 78.5%
3522910 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 50.0 4.93e-01 100.0% 70.7%
4483819 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 49.0 4.90e-01 100.0% 72.9%
3914833 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 50.0 5.06e-01 100.0% 75.7%
3267416 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 48.0 4.61e-01 100.0% 63.7%
3998645 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 47.0 4.94e-01 100.0% 76.9%
3625909 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 48.0 4.60e-01 100.0% 63.7%
3737825 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 48.0 5.36e-01 100.0% 92.7%
3773481 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 52.0 4.97e-01 100.0% 70.0%
3563539 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 48.0 4.83e-01 100.0% 72.9%
4610859 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 47.0 4.94e-01 100.0% 78.5%
3270547 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 47.0 4.94e-01 100.0% 78.5%
3170922 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 48.0 4.92e-01 100.0% 76.5%
3900208 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 47.0 4.97e-01 100.0% 79.7%
436188 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 49.0 5.07e-01 100.0% 80.6%
3480204 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 49.0 5.13e-01 100.0% 84.6%
1263753 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 48.0 5.16e-01 100.0% 88.3%
3525376 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 48.0 4.95e-01 100.0% 81.5%
3225762 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 45.0 4.48e-01 100.0% 69.3%
3523030 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.62 49.0 5.06e-01 100.0% 89.2%
3679362 4.1.1.351 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_ISE2 0.61 55.0 5.15e-01 100.0% 90.6%
3585452 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.59 47.0 4.79e-01 100.0% 85.7%
3588521 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.58 37.0 4.02e-01 97.1% 81.8%
185084 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.57 36.0 3.89e-01 95.7% 76.3%
3603847 4.1.1.144 ↗ beta barrels › SH3 › SH3 › SH3 › Ago_PAZ_arc 0.56 48.0 4.34e-01 100.0% 73.0%
3517456 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.53 48.0 4.67e-01 100.0% 90.7%
4943857 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.52 37.0 2.55e-01 77.1% 54.5%
4526652 309.1.2.1 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD 0.52 43.0 3.31e-01 97.1% 65.6%