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MH576973.1__AXH67882.1__SEA_BROMDEN_77__00077

Bact-Vir

MH576973.1__AXH67882.1__SEA_BROMDEN_77__00077

Identity

Accession:
MH576973 ↗
Kingdom:
phage

Quality

90.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vilmaviridae› Bromdenvirus› Mycobacterium_phage_Bromden

TaxID: 2283252

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-106
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m7kA00 3.30.40.220 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.57 44.0 3.86e-01 80.6% 62.0%
2cnqA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.56 38.0 3.39e-01 71.4% 65.0%
1ha6A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 34.0 3.88e-01 91.8% 91.4%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3952776 377.1.1.88 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › HNH 0.67 43.0 5.16e-01 76.5% 98.5%
3733718 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.62 34.0 3.66e-01 93.9% 61.2%
4303143 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.61 39.0 4.11e-01 84.7% 72.9%
3414520 377.1.1.18 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-AD 0.60 43.0 4.85e-01 74.5% 98.7%
3859059 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.56 40.0 4.21e-01 90.8% 81.1%
3880422 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.55 37.0 4.30e-01 93.9% 98.5%
3898211 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.55 40.0 4.52e-01 89.8% 100.0%
3894564 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.54 41.0 4.46e-01 100.0% 95.2%
4030033 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.54 29.0 3.26e-01 88.8% 68.0%
5071329 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.52 34.0 3.60e-01 73.5% 76.5%
3887159 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.51 33.0 3.91e-01 90.8% 100.0%