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MH588544.1__AXQ68230.1__CcrBL10_gp026__00026

Bact-Vir

MH588544.1__AXQ68230.1__CcrBL10_gp026__00026

Identity

Accession:
MH588544 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-93
PDB
D2 high residues 111-157
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5wzoA00 1.20.90.10 Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain 0.79 46.0 3.32e-01 87.2% 22.8%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 56.0 3.99e-01 78.7% 50.0%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 51.0 4.13e-01 70.2% 80.5%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 3.79e-01 76.6% 50.8%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 52.0 4.18e-01 76.6% 83.7%
1yf2A02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.72 48.0 3.65e-01 70.2% 41.1%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.70 49.0 4.61e-01 74.5% 73.7%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.68 46.0 3.38e-01 97.9% 26.2%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 58.0 4.38e-01 93.6% 55.7%
4hn3A00 3.10.570.10 Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain 0.66 57.0 3.42e-01 100.0% 14.5%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 4.32e-01 100.0% 98.1%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.65 49.0 3.64e-01 100.0% 32.2%
6zhhA01 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.64 49.0 3.37e-01 87.2% 22.8%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.64 57.0 4.46e-01 100.0% 48.4%
6jgwA01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.64 43.0 3.29e-01 85.1% 28.1%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 3.70e-01 76.6% 76.7%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 3.67e-01 76.6% 85.6%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.63 54.0 4.46e-01 97.9% 98.8%
1q5qH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.62 54.0 3.52e-01 100.0% 22.8%
2j5bA02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.62 47.0 3.61e-01 87.2% 70.2%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 45.0 3.74e-01 80.9% 96.4%
2cw7A02 1.10.10.1010 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV 0.61 50.0 3.51e-01 91.5% 43.2%
2w4sA00 1.10.10.1440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain 0.60 52.0 4.33e-01 100.0% 59.3%
3c1dB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 4.28e-01 87.2% 69.4%
1qgiA01 3.30.386.10 Alpha Beta › 2-Layer Sandwich › Chitosanase; Chain A, domain 2 › Chitosanase, subunit A, domain 2 0.60 46.0 3.31e-01 87.2% 87.8%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 53.0 4.02e-01 100.0% 50.5%
5ucoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.60 52.0 3.65e-01 100.0% 38.6%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.60 45.0 3.97e-01 80.9% 76.1%
3r4iA02 6.10.140.960 Special › Helix non-globular › Helix Hairpins › 0.60 44.0 4.13e-01 83.0% 71.7%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.59 48.0 3.53e-01 87.2% 46.0%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 3.91e-01 80.9% 64.3%
2jokA01 1.10.4120.10 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain 0.58 47.0 3.31e-01 100.0% 59.4%
3k4oA00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.57 50.0 3.12e-01 100.0% 20.0%
3gv5B01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.57 51.0 3.66e-01 100.0% 54.5%
2i8eA01 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 47.0 4.10e-01 100.0% 60.8%
7npaA02 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 40.0 3.35e-01 76.6% 85.9%
3h6pC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.56 48.0 4.58e-01 100.0% 89.3%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 3.36e-01 100.0% 73.9%
3d0jA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 47.0 3.39e-01 100.0% 78.3%
3wgbC02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 40.0 3.32e-01 80.9% 79.5%
1yqhA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 46.0 3.52e-01 95.7% 58.7%
3k8pC01 1.20.58.1440 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 42.0 3.41e-01 100.0% 44.8%
3pvsA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.51 38.0 3.38e-01 87.2% 55.3%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3594658 210.1.3.0 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases 0.82 74.0 4.73e-01 100.0% 22.4%
3968802 3831.1.1.1 alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI 0.75 49.0 3.74e-01 85.1% 32.7%
4945461 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 54.0 4.23e-01 76.6% 69.5%
3585138 4275.1.1.9 alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › PF26809 0.73 64.0 4.32e-01 100.0% 51.4%
4266122 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.72 52.0 4.09e-01 76.6% 60.0%
4988993 5086.1.1.231 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Rad50_zn_hook 0.70 58.0 3.98e-01 93.6% 28.0%
5054860 3755.3.1.305 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Rad50_zn_hook 0.70 58.0 3.78e-01 93.6% 22.7%
3387406 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.70 56.0 4.27e-01 95.7% 39.0%
4090636 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.70 50.0 4.38e-01 76.6% 81.4%
5023516 3922.1.1.269 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Rad50_zn_hook 0.69 56.0 3.55e-01 93.6% 17.9%
3945104 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.69 55.0 3.52e-01 87.2% 61.8%
4051681 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.69 50.0 3.55e-01 76.6% 42.2%
5051539 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.69 49.0 3.73e-01 76.6% 55.7%
4520820 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.69 47.0 4.02e-01 72.3% 73.3%
4284807 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.68 48.0 3.44e-01 91.5% 25.0%
5047150 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.68 56.0 3.67e-01 93.6% 21.5%
3280706 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.68 45.0 3.88e-01 97.9% 41.2%
4060154 4974.1.1.0 alpha bundles › CRISPR-Cas system first helical domain › CRISPR-Cas system first helical domain › CRISPR-Cas system RNase C2c2 first helical domain 0.67 57.0 3.85e-01 100.0% 73.7%
3213470 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.67 55.0 4.23e-01 93.6% 42.0%
4995144 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.67 55.0 3.66e-01 95.7% 23.5%
3503111 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 47.0 3.64e-01 76.6% 35.2%
5057564 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.65 51.0 3.59e-01 89.4% 45.0%
4096952 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.65 56.0 4.22e-01 97.9% 72.2%
3290892 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.65 47.0 3.65e-01 91.5% 35.2%
3698130 216.1.1.14 a+b two layers › UBC-like › UBC-like › UBC-like › Med1 0.65 44.0 3.47e-01 74.5% 32.4%
5077394 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.64 46.0 3.49e-01 76.6% 53.9%
1844183 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.63 48.0 3.41e-01 80.9% 67.4%
5000489 5104.1.1.0 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.63 43.0 3.23e-01 72.3% 84.3%
3282088 101.1.9.84 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 0.63 46.0 3.72e-01 91.5% 40.0%
5013274 5011.1.1.0 extended segments › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa 0.62 40.0 3.30e-01 76.6% 36.5%
5036014 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.62 54.0 4.36e-01 100.0% 55.8%
4033471 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.62 48.0 3.75e-01 83.0% 68.4%
4309637 1036.1.1.1 a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 0.62 53.0 4.29e-01 93.6% 53.6%
5061540 2498.1.1.147 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF7897 0.62 53.0 3.19e-01 100.0% 13.9%
4977215 304.117.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.61 52.0 4.80e-01 93.6% 73.3%
4959083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 50.0 3.36e-01 89.4% 43.5%
4140739 1057.1.1.1 a+b two layers › Endonuclease PI-TkoII domain IV › Endonuclease PI-TkoII domain IV › Endonuclease PI-TkoII domain IV › PI-TkoII_IV 0.61 51.0 3.52e-01 91.5% 41.3%
3813437 3543.1.1.4 alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF716 0.61 53.0 3.32e-01 100.0% 50.0%
137635 3818.1.1.1 alpha arrays › PHAX RNA-binding domain › PHAX RNA-binding domain › PHAX RNA-binding domain › PHAX_RNA-bd 0.60 52.0 4.33e-01 100.0% 59.3%
4940192 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.60 52.0 4.01e-01 100.0% 46.5%
3840120 601.50.1.1 alpha bundles › Four-helical up-and-down bundle › Flagellar cap protein FliD helical bundle domain › Flagellar cap protein FliD helical bundle domain › FliD_C 0.60 51.0 3.48e-01 100.0% 54.6%
3575264 604.12.1.61 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Clc-like 0.59 47.0 3.45e-01 85.1% 44.3%
5046672 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 47.0 3.58e-01 89.4% 92.2%
4933930 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.59 45.0 3.87e-01 85.1% 86.3%
3885052 145.1.1.4 alpha arrays › F-box domain › F-box domain › F-box domain › ASXH 0.59 48.0 4.01e-01 100.0% 70.5%
5071156 3714.1.1.1 a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical 0.58 47.0 3.21e-01 100.0% 51.0%
5078551 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.58 36.0 3.42e-01 97.9% 48.3%
4027765 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.58 43.0 3.15e-01 91.5% 29.2%
3655694 4992.1.1.0 extended segments › RelB-like › RelB-like › RelB-like 0.57 49.0 3.97e-01 93.6% 69.4%
4966804 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.55 40.0 3.37e-01 78.7% 75.3%
4197446 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.54 45.0 3.24e-01 91.5% 70.4%
3976015 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.54 46.0 3.83e-01 93.6% 82.5%
4025596 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.54 44.0 4.11e-01 93.6% 80.0%
3911302 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.54 42.0 3.82e-01 87.2% 92.3%
4563137 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.53 39.0 3.31e-01 80.9% 81.2%
3659679 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.53 41.0 3.33e-01 87.2% 70.5%
5040129 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.53 46.0 3.58e-01 95.7% 61.1%
3894383 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.52 35.0 3.42e-01 74.5% 85.5%
2560464 101.1.2.60 alpha arrays › HTH › HTH › winged helix domain › HA2_N 0.51 38.0 3.48e-01 85.1% 64.7%
3974683 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.50 39.0 3.69e-01 100.0% 70.9%