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MH588545.1__AXQ68954.1__CcrPW_gp415c__00415
Bact-VirMH588545.1__AXQ68954.1__CcrPW_gp415c__00415
Identity
- Accession:
- MH588545 ↗
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Colossusvirus›
Caulobacter_phage_CcrPW
TaxID: 2283271
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-73
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6iw6A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 47.0 | 4.05e-01 | 84.3% | 93.5% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.59 | 48.0 | 4.15e-01 | 90.0% | 89.1% |
| 4whiA00 | 2.40.128.600 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 47.0 | 4.18e-01 | 91.4% | 77.5% |
| 2ojhA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 41.0 | 2.74e-01 | 78.6% | 42.6% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.55 | 35.0 | 3.15e-01 | 82.9% | 44.4% |
| 3gdoA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 47.0 | 3.50e-01 | 100.0% | 45.7% |
| 2ch9A01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 44.0 | 3.80e-01 | 90.0% | 94.7% |
| 1twfI01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 33.0 | 3.81e-01 | 92.9% | 91.3% |
| 2l4vA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 3.70e-01 | 95.7% | 94.8% |
| 3lidA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 44.0 | 3.63e-01 | 92.9% | 92.5% |
| 3e0jA01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.53 | 45.0 | 3.05e-01 | 100.0% | 77.3% |
| 1xezA02 | 2.70.240.20 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/Hemolysin toxin, cytolysin domain | 0.53 | 41.0 | 2.64e-01 | 90.0% | 56.4% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.53 | 37.0 | 4.03e-01 | 78.6% | 91.2% |
| 2kxpA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.52 | 38.0 | 3.36e-01 | 78.6% | 76.6% |
| 3ho6B00 | 3.40.50.11050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain | 0.52 | 43.0 | 3.07e-01 | 100.0% | 27.9% |
| 2ej8B00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 38.0 | 3.12e-01 | 78.6% | 74.8% |
| 3uepA00 | 2.30.330.10 | Mainly Beta › Roll › Surface presentation of antigens (SPOA) › SpoA-like | 0.51 | 35.0 | 3.28e-01 | 70.0% | 70.6% |
| 3s6xC03 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.50 | 28.0 | 3.35e-01 | 88.6% | 92.5% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4629015 | 4050.1.1.2 ↗ | few secondary structure elements › beta-barrel domain in Capz › beta-barrel domain in Capz › beta-barrel domain in Capz › F-actin_cap_A | 0.65 | 33.0 | 3.75e-01 | 70.0% | 62.0% |
| 4024148 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.65 | 34.0 | 4.37e-01 | 88.6% | 100.0% |
| 4886106 | 4030.1.1.2 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › F-actin_cap_A | 0.65 | 32.0 | 3.63e-01 | 70.0% | 62.0% |
| 4131976 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.61 | 48.0 | 3.76e-01 | 85.7% | 75.3% |
| 3356611 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.60 | 38.0 | 4.19e-01 | 92.9% | 81.8% |
| 3484229 | 4050.1.1.0 ↗ | few secondary structure elements › beta-barrel domain in Capz › beta-barrel domain in Capz › beta-barrel domain in Capz | 0.60 | 31.0 | 3.53e-01 | 70.0% | 64.0% |
| 3497020 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.60 | 33.0 | 3.93e-01 | 92.9% | 86.0% |
| 3262513 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.59 | 47.0 | 3.95e-01 | 87.1% | 88.3% |
| 3585435 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.58 | 47.0 | 3.86e-01 | 90.0% | 84.4% |
| 3799622 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 47.0 | 3.57e-01 | 90.0% | 77.6% |
| 4027092 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.58 | 44.0 | 3.90e-01 | 85.7% | 76.4% |
| 3935170 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.57 | 33.0 | 3.94e-01 | 91.4% | 88.9% |
| 3786078 | 109.4.1.1764 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 | 0.57 | 42.0 | 2.55e-01 | 78.6% | 47.1% |
| 4027686 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.56 | 39.0 | 4.25e-01 | 71.4% | 96.4% |
| 3928448 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.56 | 34.0 | 4.04e-01 | 92.9% | 95.6% |
| 4937515 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.56 | 42.0 | 3.91e-01 | 81.4% | 98.9% |
| 3412650 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 44.0 | 3.89e-01 | 90.0% | 95.5% |
| 3593875 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 33.0 | 3.64e-01 | 92.9% | 74.5% |
| 3208203 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.55 | 33.0 | 3.62e-01 | 91.4% | 74.5% |
| 4939442 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 41.0 | 2.69e-01 | 80.0% | 23.9% |
| 4029439 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.55 | 45.0 | 4.56e-01 | 88.6% | 89.9% |
| 3189994 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.55 | 33.0 | 3.09e-01 | 92.9% | 47.8% |
| 3926232 | 3409.1.1.0 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain | 0.55 | 47.0 | 3.76e-01 | 98.6% | 100.0% |
| 3799834 | 3409.1.1.2 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › VPS38 | 0.55 | 46.0 | 3.76e-01 | 98.6% | 98.6% |
| 3667119 | 207.1.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_8 | 0.55 | 42.0 | 2.85e-01 | 84.3% | 37.8% |
| 8012 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.54 | 33.0 | 3.73e-01 | 92.9% | 85.7% |
| 3505640 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.54 | 33.0 | 3.53e-01 | 92.9% | 71.7% |
| 5022494 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 40.0 | 3.55e-01 | 78.6% | 81.0% |
| 5016027 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 38.0 | 3.59e-01 | 75.7% | 91.1% |
| 3500033 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 32.0 | 3.70e-01 | 91.4% | 86.0% |
| 4389597 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.53 | 42.0 | 3.94e-01 | 90.0% | 83.3% |
| 3927366 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.53 | 43.0 | 3.44e-01 | 91.4% | 87.3% |
| 3702861 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.52 | 32.0 | 3.54e-01 | 92.9% | 78.2% |
| 3556708 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.52 | 39.0 | 3.86e-01 | 81.4% | 84.0% |
| 3522043 | 375.1.1.290 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › OCRE | 0.52 | 38.0 | 3.97e-01 | 95.7% | 91.7% |
| 3481737 | 4126.1.1.1 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA | 0.52 | 40.0 | 2.78e-01 | 84.3% | 89.6% |
| 4000403 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.51 | 34.0 | 3.88e-01 | 71.4% | 96.0% |
| 3647333 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.51 | 38.0 | 3.42e-01 | 80.0% | 63.0% |
| 3260335 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.51 | 41.0 | 2.57e-01 | 87.1% | 93.5% |
| 3827703 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.51 | 37.0 | 2.43e-01 | 77.1% | 28.7% |
| 4980041 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 30.0 | 3.54e-01 | 87.1% | 91.1% |
| 3501098 | 4126.1.1.1 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA | 0.50 | 39.0 | 2.79e-01 | 90.0% | 76.1% |
| 3404254 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.50 | 41.0 | 3.29e-01 | 92.9% | 95.3% |
| 3342083 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.50 | 37.0 | 2.51e-01 | 81.4% | 25.4% |