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MH588546.1__AXQ69088.1__CcrBL9_gp064c__00064

Bact-Vir

MH588546.1__AXQ69088.1__CcrBL9_gp064c__00064

Identity

Accession:
MH588546 ↗
Kingdom:
phage

Quality

70.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Bertelyvirus› Caulobacter_phage_CcrBL9

TaxID: 2283270

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-88
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gzeA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.69 50.0 3.79e-01 77.0% 98.1%
1zpsA01 3.10.20.810 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase 0.63 52.0 5.08e-01 93.1% 81.1%
2hz7A05 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.62 49.0 4.32e-01 85.1% 88.3%
4xzjA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.60 46.0 3.48e-01 81.6% 94.3%
2jjqA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 29.0 3.42e-01 94.3% 66.7%
1zboA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.58 47.0 4.34e-01 88.5% 90.3%
5zliA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.57 49.0 4.66e-01 96.6% 83.0%
4mtnA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 29.0 3.35e-01 79.3% 66.7%
3gwyB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.57 49.0 4.30e-01 96.6% 77.4%
2ecuA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 48.0 4.08e-01 94.3% 67.1%
3f13B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 49.0 4.23e-01 100.0% 95.2%
4lniJ01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.56 48.0 4.55e-01 96.6% 84.6%
2j4xA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 33.0 3.59e-01 92.0% 70.8%
2dnfA01 3.10.20.230 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain 0.56 42.0 4.22e-01 81.6% 84.3%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 34.0 3.65e-01 70.1% 71.2%
2d3aA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.56 48.0 4.65e-01 98.9% 84.2%
3q91B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 46.0 4.08e-01 97.7% 73.3%
5cfjA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 45.0 3.90e-01 96.6% 78.6%
1x1mA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 46.0 4.37e-01 100.0% 88.8%
4hpqB00 2.60.270.60 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Autophagy-related protein 31 0.53 48.0 4.34e-01 100.0% 75.7%
5b1rA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.52 34.0 3.11e-01 81.6% 49.1%
1ktgA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 44.0 3.83e-01 96.6% 78.1%
3k6oA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.51 30.0 3.21e-01 94.3% 65.8%
1tm0A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.51 40.0 3.36e-01 82.8% 95.2%
3wfoA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.50 40.0 3.35e-01 87.4% 96.8%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4947785 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.74 51.0 5.60e-01 83.9% 88.4%
3280971 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.72 51.0 4.13e-01 73.6% 61.6%
2410012 237.1.1.2 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART 0.72 50.0 3.86e-01 72.4% 51.4%
4228956 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 34.0 3.96e-01 82.8% 61.5%
4232299 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.64 48.0 4.73e-01 80.5% 76.8%
4654417 239.1.1.5 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C 0.63 50.0 4.83e-01 87.4% 84.0%
1687631 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.60 46.0 3.43e-01 81.6% 90.0%
4097972 239.2.1.1 ↗ beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.60 52.0 4.72e-01 95.4% 73.9%
3847347 237.1.1.2 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART 0.59 44.0 3.27e-01 79.3% 43.5%
3508632 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 33.0 3.56e-01 85.1% 64.0%
165635 2.2.1.1 ↗ beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Stap_Strp_toxin 0.59 33.0 3.39e-01 93.1% 56.5%
3252939 2.1.1.37 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.58 30.0 3.40e-01 86.2% 64.6%
3322155 11.1.4.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PF30918 0.57 45.0 4.08e-01 86.2% 100.0%
3998577 2.1.1.253 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 0.57 29.0 3.30e-01 79.3% 64.6%
3308224 239.4.1.0 ↗ beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain 0.56 48.0 4.63e-01 96.6% 82.0%
3812521 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.56 42.0 3.95e-01 80.5% 100.0%
4513981 239.4.1.1 ↗ beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.56 47.0 4.30e-01 95.4% 78.3%
3388514 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 35.0 3.56e-01 93.1% 64.7%
3847997 239.4.1.1 ↗ beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.56 48.0 4.55e-01 96.6% 81.0%
3997671 7516.1.1.13 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_7C,Glyco_transf_7N 0.55 45.0 3.64e-01 89.7% 93.1%
3618406 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.55 35.0 3.54e-01 82.8% 62.2%
3296510 221.1.1.80 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › KHA 0.55 41.0 4.50e-01 83.9% 98.6%
3388329 7599.1.1.1 ↗ a/b three-layered sandwiches › UPF0246 protein YaaA › UPF0246 protein YaaA › UPF0246 protein YaaA › H2O2_YaaD 0.55 42.0 3.03e-01 81.6% 34.3%
3704602 221.4.1.0 ↗ a+b two layers › beta-Grasp › Nudix › Nudix 0.54 46.0 3.20e-01 97.7% 57.3%
5072585 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.54 45.0 3.32e-01 97.7% 54.3%
3591144 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.53 46.0 3.94e-01 100.0% 88.7%
4424922 237.1.1.34 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART, ADPrib_exo_Tox 0.53 43.0 3.19e-01 88.5% 99.1%
3628236 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.53 43.0 2.78e-01 89.7% 71.6%
4995185 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.53 45.0 3.97e-01 96.6% 69.2%
3496962 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 34.0 3.37e-01 93.1% 63.3%
3999004 239.3.1.0 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain 0.52 43.0 3.00e-01 89.7% 37.2%
3758110 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.52 43.0 3.24e-01 93.1% 77.0%
3961532 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.52 42.0 3.91e-01 88.5% 86.4%
3741375 239.3.1.0 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain 0.52 42.0 3.68e-01 90.8% 60.7%
3340613 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 42.0 4.38e-01 95.4% 98.8%