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MH588546.1__AXQ69495.1__CcrBL9_gp471__00471

Bact-Vir

MH588546.1__AXQ69495.1__CcrBL9_gp471__00471

Identity

Accession:
MH588546 ↗
Kingdom:
phage

Quality

63.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Bertelyvirus› Caulobacter_phage_CcrBL9

TaxID: 2283270

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-105
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.71 48.0 3.54e-01 100.0% 28.2%
4n9jA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.65 38.0 3.32e-01 100.0% 38.3%
4d6gA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.64 53.0 4.42e-01 93.0% 88.5%
1fyhB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 47.0 4.23e-01 81.7% 68.9%
2ra8A01 2.20.140.10 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain 0.63 40.0 4.03e-01 93.0% 63.5%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 43.0 3.92e-01 83.1% 52.5%
6etzA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 44.0 4.24e-01 80.3% 65.5%
3mi6B03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 50.0 4.43e-01 91.5% 96.2%
1r0uA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 40.0 3.17e-01 100.0% 33.1%
6phxA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 48.0 4.45e-01 91.5% 95.8%
3b5hA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 44.0 4.28e-01 81.7% 70.7%
3ucqA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 51.0 4.96e-01 97.2% 98.7%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.59 33.0 3.39e-01 100.0% 56.5%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.59 49.0 3.41e-01 93.0% 87.8%
7vt9A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 46.0 4.63e-01 85.9% 98.6%
2jkdB00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.58 48.0 3.81e-01 93.0% 49.3%
3zt9A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.57 46.0 3.48e-01 93.0% 58.3%
2x10A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 43.0 3.91e-01 85.9% 66.3%
2pmlX01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 44.0 3.68e-01 87.3% 71.8%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 44.0 2.91e-01 93.0% 30.4%
4fxtA02 2.60.40.2060 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 40.0 3.61e-01 81.7% 69.2%
1yuaA02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.55 36.0 3.97e-01 95.8% 84.5%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 37.0 3.32e-01 70.4% 77.5%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 44.0 3.77e-01 98.6% 55.3%
1q57G01 2.20.25.180 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.54 40.0 4.01e-01 100.0% 76.7%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 41.0 2.69e-01 84.5% 25.3%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 37.0 3.28e-01 93.0% 49.5%
1jssA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 46.0 3.39e-01 100.0% 39.7%
1xv2C01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.52 36.0 3.16e-01 98.6% 46.8%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 46.0 2.81e-01 97.2% 19.2%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.51 42.0 3.84e-01 100.0% 67.3%
3a7rA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.51 37.0 3.56e-01 98.6% 66.3%
5bv3D01 3.30.200.40 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain 0.50 44.0 3.77e-01 95.8% 83.9%
4joiC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 38.0 3.19e-01 80.3% 50.8%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.50 45.0 3.54e-01 100.0% 71.2%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3707402 12.6.1.1 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_65C 0.79 57.0 5.67e-01 87.3% 72.0%
3593972 12.6.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related 0.75 53.0 5.64e-01 84.5% 86.7%
3832276 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.67 56.0 4.85e-01 94.4% 74.8%
3579137 243.3.1.18 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › NIDO 0.67 56.0 4.97e-01 93.0% 78.8%
3519601 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.66 53.0 4.38e-01 100.0% 50.8%
3690503 241.2.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.66 47.0 4.05e-01 100.0% 48.6%
4975453 844.1.1.2 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.64 50.0 3.75e-01 100.0% 35.5%
4026990 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 46.0 4.60e-01 85.9% 74.7%
2141856 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 46.0 4.34e-01 81.7% 65.1%
3624656 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.62 40.0 3.95e-01 100.0% 61.3%
3998714 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.62 49.0 3.20e-01 100.0% 20.0%
3930814 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.61 48.0 3.18e-01 100.0% 21.1%
1942596 12.3.1.22 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N 0.61 53.0 3.69e-01 100.0% 67.3%
None — 0.60 46.0 2.89e-01 83.1% 22.0%
4026604 5.1.8.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.60 50.0 4.35e-01 93.0% 78.2%
3267959 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 42.0 4.01e-01 83.1% 62.4%
3786775 109.54.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 0.59 49.0 2.92e-01 93.0% 17.6%
3913606 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 43.0 4.03e-01 81.7% 68.9%
5036626 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.57 44.0 2.74e-01 83.1% 17.8%
3774836 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.56 42.0 3.97e-01 81.7% 72.2%
5039195 5.1.4.40 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.56 43.0 3.13e-01 84.5% 36.7%
3793430 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.56 38.0 3.55e-01 94.4% 54.7%
3755410 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.56 42.0 2.64e-01 84.5% 18.4%
3539945 12.5.1.2 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS 0.55 46.0 3.48e-01 97.2% 88.9%
3996555 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 4.43e-01 100.0% 100.0%
2516379 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.55 39.0 3.49e-01 76.1% 77.4%
3725227 519.1.1.1 ↗ a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS 0.53 44.0 4.25e-01 95.8% 78.8%
5065820 244.4.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › PF27537 0.53 38.0 2.93e-01 78.9% 90.8%
4207220 244.4.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit 0.52 38.0 3.50e-01 97.2% 60.0%
3957330 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 43.0 2.88e-01 94.4% 53.6%
3273326 316.1.1.56 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.51 42.0 3.04e-01 100.0% 50.4%
4671157 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 37.0 2.60e-01 78.9% 43.9%
4960601 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 45.0 3.20e-01 100.0% 88.1%
4646778 12.3.1.19 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.50 39.0 2.83e-01 93.0% 89.1%
2475231 519.1.1.1 ↗ a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS 0.50 44.0 3.71e-01 95.8% 80.5%