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MH588546.1__AXQ69504.1__CcrBL9_gp480__00480

Bact-Vir

MH588546.1__AXQ69504.1__CcrBL9_gp480__00480

Identity

Accession:
MH588546 ↗
Kingdom:
phage

Quality

68.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Bertelyvirus› Caulobacter_phage_CcrBL9

TaxID: 2283270

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-92
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oggA01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.71 49.0 4.01e-01 72.6% 40.3%
2gu1A02 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 50.0 4.44e-01 78.1% 78.8%
1gkuB07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.66 43.0 3.79e-01 74.0% 47.1%
4dduA07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.66 43.0 3.73e-01 74.0% 44.9%
4fumA01 2.20.230.10 Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. 0.62 45.0 4.53e-01 76.7% 94.6%
3cjeA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.62 43.0 3.46e-01 74.0% 70.7%
4iu2B01 2.60.40.3810 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 53.0 4.56e-01 97.3% 92.3%
4qqsB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 46.0 3.04e-01 80.8% 25.9%
4rnyA02 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 53.0 4.28e-01 100.0% 98.0%
1pn2B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 43.0 3.53e-01 97.3% 37.8%
1cruA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 46.0 2.85e-01 82.2% 17.9%
4l8nA03 3.30.160.670 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 45.0 3.54e-01 80.8% 51.2%
3bgaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 42.0 3.63e-01 72.6% 69.4%
2ltjA00 2.20.230.10 Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. 0.60 42.0 3.69e-01 74.0% 59.5%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.59 49.0 3.87e-01 91.8% 78.6%
5c71A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 41.0 3.77e-01 72.6% 68.8%
3bjsA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 40.0 3.47e-01 71.2% 43.6%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.59 51.0 3.39e-01 100.0% 94.3%
6ihjC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 46.0 3.55e-01 86.3% 37.5%
1y7uA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 48.0 3.74e-01 97.3% 40.9%
3b7kB01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 44.0 3.63e-01 95.9% 44.3%
4pswB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 50.0 3.25e-01 100.0% 79.0%
2q3xA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.57 45.0 3.60e-01 83.6% 57.0%
3qldA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 49.0 3.88e-01 100.0% 90.8%
2b3rA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 41.0 3.43e-01 80.8% 66.1%
3lqmA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 40.0 3.58e-01 78.1% 64.7%
8shiI01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 38.0 3.43e-01 75.3% 84.6%
5iqlA00 2.60.40.1970 Mainly Beta › Sandwich › Immunoglobulin-like › YEATS domain 0.53 45.0 3.83e-01 100.0% 88.5%
3hn3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 3.26e-01 72.6% 70.2%
1sjdB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 46.0 3.84e-01 100.0% 93.9%
3a0oB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.27e-01 79.5% 59.5%
2yq2A01 2.60.320.20 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › Pestivirus envelope glycoprotein E2, domain A 0.50 35.0 3.33e-01 74.0% 94.3%
1n7vA02 2.60.330.10 Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 0.50 34.0 2.95e-01 98.6% 42.3%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3704389 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 47.0 4.52e-01 74.0% 100.0%
4948943 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 44.0 4.37e-01 72.6% 64.1%
2765234 243.3.1.12 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SQAPI 0.66 46.0 4.22e-01 78.1% 55.7%
3704401 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 44.0 3.82e-01 79.5% 47.8%
3326561 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 45.0 3.89e-01 78.1% 60.5%
3216801 5.1.2.9 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Apyrase 0.61 54.0 3.51e-01 100.0% 93.0%
4997175 218.1.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.61 42.0 3.66e-01 71.2% 47.3%
3613469 330.2.1.0 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.61 42.0 3.43e-01 72.6% 45.0%
1068683 7503.1.1.8 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › DUF4136 0.60 45.0 3.35e-01 80.8% 42.0%
3936956 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.60 45.0 3.95e-01 80.8% 79.1%
3272150 5.1.12.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains 0.59 43.0 2.98e-01 76.7% 33.5%
3472006 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 42.0 3.43e-01 75.3% 71.5%
3222908 11.1.5.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › T-box 0.58 42.0 3.24e-01 78.1% 64.9%
3703043 5.1.4.597 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_3 0.57 46.0 3.17e-01 94.5% 55.6%
2841761 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 50.0 3.48e-01 100.0% 44.4%
3255739 295.1.1.4 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.55 37.0 3.81e-01 71.2% 72.9%
4941513 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.54 47.0 4.18e-01 100.0% 88.2%
5022921 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 39.0 3.55e-01 78.1% 70.5%
3704345 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 39.0 4.04e-01 76.7% 100.0%
3924224 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.54 39.0 3.20e-01 78.1% 65.7%
3862045 11.1.1.640 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.53 38.0 3.31e-01 75.3% 65.2%
3635086 868.1.1.8 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › SLS1_C 0.53 47.0 3.11e-01 98.6% 50.8%
3681710 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.53 44.0 4.03e-01 90.4% 82.1%
4089495 222.1.1.14 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MC_hydratase 0.53 37.0 2.84e-01 79.5% 28.4%
4984061 2484.1.1.59 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.53 45.0 3.01e-01 95.9% 87.2%
4974213 2484.1.1.77 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.53 46.0 3.43e-01 98.6% 95.9%
3962256 295.1.1.32 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DDE_Tnp_1 0.53 40.0 3.38e-01 98.6% 45.9%
3838901 5085.1.1.0 ↗ a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.53 37.0 2.37e-01 75.3% 56.8%
3824181 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.52 35.0 3.73e-01 71.2% 85.0%
3958189 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.52 39.0 3.41e-01 98.6% 49.6%
4010500 7503.1.1.24 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PF25851 0.52 40.0 3.21e-01 84.9% 52.6%
3337469 11.1.1.720 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IG_AIR9 0.51 36.0 3.20e-01 74.0% 68.2%
3396462 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.51 34.0 3.51e-01 71.2% 76.9%
3716893 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 41.0 2.65e-01 97.3% 33.1%
3733996 5.1.2.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.50 45.0 2.88e-01 100.0% 34.4%
3609858 220.1.1.14 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.50 44.0 3.95e-01 100.0% 79.0%
3186853 881.1.1.2 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1 0.50 43.0 3.27e-01 100.0% 40.5%
3281968 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 38.0 3.61e-01 94.5% 66.3%
3900560 2484.1.1.120 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_4 0.50 43.0 3.34e-01 97.3% 69.1%