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MH590593.1__AXN54050.1__SEA_RABINOVISH_97__00094
Bact-VirMH590593.1__AXN54050.1__SEA_RABINOVISH_97__00094
Identity
- Accession:
- MH590593 ↗
- Kingdom:
- phage
Quality
72.9
mean pLDDT
Taxonomy
TaxID: 2283291
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 154-192
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4tmaJ00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.73 | 62.0 | 5.49e-01 | 100.0% | 66.7% |
| 2w0tA00 | 3.30.60.160 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.70 | 58.0 | 5.69e-01 | 100.0% | 90.7% |
| 3mekA02 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 57.0 | 5.26e-01 | 89.7% | 75.5% |
| 5yvxA00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.67 | 47.0 | 4.19e-01 | 76.9% | 70.0% |
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.65 | 47.0 | 4.90e-01 | 79.5% | 88.9% |
| 5sviB00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.63 | 45.0 | 4.14e-01 | 76.9% | 71.7% |
| 4n4fA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 44.0 | 4.39e-01 | 79.5% | 87.5% |
| 1rfhA01 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.60 | 42.0 | 4.15e-01 | 74.4% | 90.2% |
| 3kxyT00 | 6.20.290.10 | Special › Other non-globular › Dna Ligase; domain 1 › | 0.60 | 33.0 | 2.85e-01 | 94.9% | 29.2% |
| 3hh2D04 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 44.0 | 3.68e-01 | 82.1% | 75.7% |
| 2gviA03 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 44.0 | 4.65e-01 | 84.6% | 97.1% |
| 3fwlA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.59 | 46.0 | 2.70e-01 | 89.7% | 19.8% |
| 1y8fA00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 50.0 | 4.62e-01 | 100.0% | 80.4% |
| 2od1A00 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 48.0 | 4.51e-01 | 94.9% | 74.0% |
| 6xi7B02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.58 | 43.0 | 4.33e-01 | 84.6% | 87.2% |
| 2vrwB03 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.57 | 47.0 | 4.35e-01 | 97.4% | 77.4% |
| 2xjyA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.57 | 48.0 | 4.14e-01 | 97.4% | 85.7% |
| 3j7aZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.56 | 45.0 | 3.83e-01 | 97.4% | 97.2% |
| 2mknA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.56 | 42.0 | 4.17e-01 | 100.0% | 84.1% |
| 1weeA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 41.0 | 3.63e-01 | 94.9% | 56.9% |
| 2ch5B02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 43.0 | 2.78e-01 | 89.7% | 43.5% |
| 4ht4A00 | 3.30.930.30 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › | 0.51 | 36.0 | 2.44e-01 | 84.6% | 25.8% |
| 1bccD02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.51 | 38.0 | 2.40e-01 | 82.1% | 83.7% |
| 2fe3A02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.50 | 36.0 | 3.41e-01 | 92.3% | 94.7% |
| 3m7nA03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.50 | 34.0 | 3.58e-01 | 74.4% | 79.4% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031664 | 375.1.1.75 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF2197 | 0.77 | 58.0 | 5.79e-01 | 82.1% | 100.0% |
| 3918443 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 67.0 | 6.37e-01 | 100.0% | 95.6% |
| 5004198 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 54.0 | 5.60e-01 | 84.6% | 94.3% |
| 4314985 | 377.1.1.15 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YacG | 0.73 | 59.0 | 5.77e-01 | 94.9% | 83.7% |
| 3701455 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.73 | 61.0 | 5.54e-01 | 97.4% | 100.0% |
| 4155531 | 377.1.1.15 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YacG | 0.73 | 62.0 | 5.73e-01 | 100.0% | 76.0% |
| 5018523 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.71 | 58.0 | 4.89e-01 | 100.0% | 52.9% |
| 4937876 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.70 | 55.0 | 3.77e-01 | 84.6% | 26.4% |
| 5004690 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 50.0 | 5.13e-01 | 84.6% | 94.3% |
| 3419900 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.69 | 49.0 | 5.14e-01 | 79.5% | 85.7% |
| 4940877 | 377.1.1.130 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf_Tbcl_2 | 0.67 | 47.0 | 4.91e-01 | 74.4% | 94.3% |
| 4442858 | 931.1.1.15 ↗ | few secondary structure elements › Metallothionein › Metallothionein › Metallothionein › PF26927 | 0.66 | 51.0 | 5.31e-01 | 87.2% | 97.1% |
| 3802581 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 46.0 | 4.81e-01 | 79.5% | 85.7% |
| 4201209 | 375.6.1.1 ↗ | few secondary structure elements › Rubredoxin-like › FlhC-like › FlhC-like › FlhC | 0.65 | 46.0 | 4.98e-01 | 79.5% | 100.0% |
| 3625637 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.65 | 55.0 | 5.17e-01 | 100.0% | 80.0% |
| 5050300 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 46.0 | 4.77e-01 | 82.1% | 97.1% |
| 3785476 | 375.1.1.57 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Vps36-NZF-N | 0.64 | 46.0 | 4.45e-01 | 79.5% | 77.8% |
| 5016275 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.62 | 46.0 | 4.84e-01 | 82.1% | 97.1% |
| 3189914 | 375.1.1.221 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf_Tbcl_Rhp7 | 0.62 | 47.0 | 4.88e-01 | 84.6% | 100.0% |
| 3337279 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 46.0 | 4.71e-01 | 84.6% | 94.3% |
| 3592231 | 377.9.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like | 0.60 | 49.0 | 4.89e-01 | 94.9% | 95.0% |
| 3704041 | 375.1.1.77 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 | 0.58 | 41.0 | 4.54e-01 | 76.9% | 100.0% |
| 8219 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.58 | 50.0 | 4.73e-01 | 100.0% | 83.0% |
| 4990542 | 377.1.1.128 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF2175 | 0.58 | 47.0 | 4.55e-01 | 100.0% | 86.7% |
| 5021070 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.58 | 45.0 | 4.71e-01 | 89.7% | 100.0% |
| 4015777 | 376.1.6.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain | 0.57 | 45.0 | 4.12e-01 | 92.3% | 81.8% |
| 3397474 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.57 | 44.0 | 4.46e-01 | 87.2% | 92.5% |
| 3197786 | 376.1.3.75 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_Tbcl_Rhp7 | 0.57 | 47.0 | 4.37e-01 | 92.3% | 80.0% |
| 3596418 | 375.1.1.77 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 | 0.57 | 39.0 | 3.91e-01 | 76.9% | 76.7% |
| 135922 | 375.1.1.4 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RanBP | 0.56 | 36.0 | 4.07e-01 | 76.9% | 96.2% |
| 4069119 | 377.1.3.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › zf-FPG_IleRS | 0.56 | 42.0 | 4.21e-01 | 82.1% | 82.5% |
| 3790110 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 39.0 | 2.69e-01 | 100.0% | 21.4% |
| 3600531 | 4012.3.1.0 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 | 0.54 | 41.0 | 3.82e-01 | 89.7% | 83.0% |
| 3243705 | 377.1.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA | 0.54 | 43.0 | 4.04e-01 | 92.3% | 78.0% |
| 4211249 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 36.0 | 3.12e-01 | 71.8% | 41.5% |
| 3443925 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 34.0 | 3.82e-01 | 76.9% | 100.0% |
| 4478749 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 41.0 | 3.46e-01 | 100.0% | 85.9% |
| 3897345 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.53 | 39.0 | 3.93e-01 | 89.7% | 97.5% |
| 3681026 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.53 | 38.0 | 2.34e-01 | 87.2% | 12.6% |
| 3271826 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 43.0 | 3.91e-01 | 94.9% | 78.2% |
| 5068907 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 37.0 | 3.72e-01 | 87.2% | 75.6% |
| 4940040 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.53 | 42.0 | 4.04e-01 | 92.3% | 77.8% |
| 3388521 | 375.1.1.219 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4H2 | 0.53 | 35.0 | 3.71e-01 | 79.5% | 86.7% |
| 3583377 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.53 | 39.0 | 3.51e-01 | 92.3% | 60.0% |
| 3693975 | 186.2.1.1 ↗ | alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box | 0.52 | 34.0 | 2.47e-01 | 89.7% | 20.8% |
| 4929843 | 4123.1.1.0 ↗ | few secondary structure elements › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 C-terminal domain-like | 0.51 | 38.0 | 3.71e-01 | 97.4% | 100.0% |
| 3734963 | 376.1.1.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 | 0.51 | 40.0 | 4.16e-01 | 89.7% | 100.0% |
| 3355882 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 35.0 | 3.67e-01 | 74.4% | 100.0% |