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MH590598.1__AXH69841.1__SEA_KRAKATAU_66__00066
Bact-VirMH590598.1__AXH69841.1__SEA_KRAKATAU_66__00066
Identity
- Accession:
- MH590598 ↗
- Kingdom:
- phage
Quality
80.3
mean pLDDT
Taxonomy
TaxID: 2283296
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-71
Domain cluster:
rep: JN797797.1__AEW47044.1__BCP78_0037__00037__D1-69
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01507.26 best | PAPS_reduct | 26.2 | 1.00e-05 | 85.9% | 29.7% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7lhsB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.82 | 75.0 | 5.24e-01 | 100.0% | 34.7% |
| 1zunA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.81 | 74.0 | 5.32e-01 | 100.0% | 49.5% |
| 2oq2D00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.80 | 74.0 | 4.94e-01 | 100.0% | 28.9% |
| 1surA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.79 | 71.0 | 4.95e-01 | 100.0% | 32.1% |
| 2goyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.77 | 70.0 | 4.86e-01 | 100.0% | 34.2% |
| 4bwvA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.77 | 68.0 | 4.69e-01 | 100.0% | 30.4% |
| 1ni5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.74 | 67.0 | 4.65e-01 | 100.0% | 34.4% |
| 3vrhA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 61.0 | 4.03e-01 | 100.0% | 28.2% |
| 3er6A00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.56 | 39.0 | 2.95e-01 | 74.6% | 41.7% |
| 2zw9B01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 43.0 | 2.84e-01 | 85.9% | 22.3% |
| 3bhnA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.55 | 39.0 | 2.85e-01 | 74.6% | 36.6% |
| 1evjC02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 43.0 | 3.25e-01 | 85.9% | 61.3% |
| 1uqtA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 45.0 | 3.24e-01 | 98.6% | 29.6% |
| 4k2hD00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 37.0 | 2.76e-01 | 74.6% | 40.9% |
| 4kmaA02 | 3.30.1360.230 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Sufu, C-terminal domain | 0.52 | 46.0 | 3.87e-01 | 98.6% | 78.2% |
| 3cyfA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 36.0 | 2.74e-01 | 74.6% | 43.5% |
| 3f5dA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 36.0 | 2.66e-01 | 73.2% | 40.9% |
| 2wddA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.51 | 43.0 | 2.98e-01 | 100.0% | 63.4% |
| 5q22A02 | 3.40.50.12650 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 39.0 | 3.16e-01 | 85.9% | 40.5% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4930540 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.84 | 75.0 | 5.13e-01 | 100.0% | 31.2% |
| 5062204 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.83 | 76.0 | 5.20e-01 | 100.0% | 32.1% |
| 5003321 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.83 | 76.0 | 4.97e-01 | 100.0% | 27.0% |
| 3952239 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.83 | 76.0 | 5.06e-01 | 100.0% | 28.7% |
| 5009871 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.83 | 74.0 | 5.21e-01 | 100.0% | 33.7% |
| 3960419 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.82 | 75.0 | 5.06e-01 | 100.0% | 29.4% |
| 3967573 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.82 | 75.0 | 4.94e-01 | 100.0% | 33.2% |
| 4163031 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.82 | 74.0 | 5.06e-01 | 100.0% | 30.7% |
| 5038820 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.82 | 75.0 | 5.25e-01 | 100.0% | 36.2% |
| 3603161 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.82 | 75.0 | 4.95e-01 | 100.0% | 27.9% |
| 4938182 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.81 | 75.0 | 4.80e-01 | 100.0% | 33.0% |
| 4005131 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.81 | 74.0 | 4.95e-01 | 100.0% | 28.7% |
| 5082742 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.81 | 74.0 | 4.90e-01 | 100.0% | 27.8% |
| 5041769 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.81 | 73.0 | 4.78e-01 | 100.0% | 26.3% |
| 3339632 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.80 | 75.0 | 4.96e-01 | 100.0% | 31.6% |
| 4979563 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.80 | 73.0 | 4.75e-01 | 100.0% | 25.9% |
| 4948220 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.80 | 73.0 | 4.95e-01 | 100.0% | 30.8% |
| 4176030 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.79 | 72.0 | 4.84e-01 | 100.0% | 29.2% |
| 4100489 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.77 | 70.0 | 4.83e-01 | 100.0% | 36.9% |
| 4943588 | 2005.1.1.14 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PAPS_reduct | 0.77 | 70.0 | 4.63e-01 | 100.0% | 27.4% |
| 4030145 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.76 | 69.0 | 4.54e-01 | 100.0% | 29.3% |
| 4020058 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.76 | 69.0 | 4.68e-01 | 100.0% | 28.6% |
| 4094991 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.76 | 68.0 | 4.72e-01 | 100.0% | 35.7% |
| 4033318 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.75 | 68.0 | 4.74e-01 | 100.0% | 37.7% |
| 4029826 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.74 | 67.0 | 4.30e-01 | 100.0% | 27.1% |
| 4375692 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.74 | 67.0 | 4.64e-01 | 100.0% | 34.7% |
| 4322077 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.74 | 66.0 | 4.62e-01 | 100.0% | 36.4% |
| 4178958 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.74 | 66.0 | 4.58e-01 | 100.0% | 35.2% |
| 4432036 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.73 | 65.0 | 4.55e-01 | 100.0% | 36.1% |
| 4023438 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.72 | 65.0 | 4.50e-01 | 100.0% | 40.4% |
| 4296289 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.72 | 65.0 | 4.64e-01 | 100.0% | 41.0% |
| 5022820 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.72 | 63.0 | 4.55e-01 | 100.0% | 34.5% |
| 4141794 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.72 | 64.0 | 4.45e-01 | 100.0% | 36.3% |
| 4101393 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.72 | 65.0 | 4.44e-01 | 100.0% | 35.4% |
| 4234668 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.72 | 65.0 | 4.49e-01 | 100.0% | 34.8% |
| 4666944 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.72 | 65.0 | 4.53e-01 | 100.0% | 37.7% |
| 4061620 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.72 | 63.0 | 4.45e-01 | 100.0% | 37.0% |
| 3590102 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.71 | 63.0 | 4.40e-01 | 100.0% | 35.0% |
| 4487256 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.71 | 64.0 | 4.52e-01 | 100.0% | 38.6% |
| 4109217 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.71 | 63.0 | 4.38e-01 | 100.0% | 34.6% |
| 4051591 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.70 | 62.0 | 4.34e-01 | 100.0% | 35.7% |
| 3277427 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.70 | 63.0 | 4.19e-01 | 100.0% | 31.1% |
| 4101096 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.70 | 63.0 | 4.37e-01 | 100.0% | 36.1% |
| 4584133 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.70 | 63.0 | 4.22e-01 | 100.0% | 31.3% |
| 4403046 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.70 | 62.0 | 4.44e-01 | 100.0% | 39.0% |
| 3809779 | 2005.1.1.38 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTU2 | 0.70 | 62.0 | 3.99e-01 | 100.0% | 24.7% |
| 4351211 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.69 | 60.0 | 4.12e-01 | 100.0% | 30.9% |
| 4486353 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.69 | 61.0 | 4.32e-01 | 100.0% | 33.6% |
| 4499405 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.69 | 60.0 | 4.19e-01 | 100.0% | 33.9% |
| 4203886 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.69 | 60.0 | 4.11e-01 | 100.0% | 30.9% |
| 3601783 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.67 | 59.0 | 3.89e-01 | 100.0% | 28.2% |
| 4957461 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.63 | 54.0 | 4.07e-01 | 98.6% | 71.7% |
| 4960578 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.60 | 52.0 | 3.81e-01 | 100.0% | 66.2% |
| 3794159 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.60 | 40.0 | 3.10e-01 | 77.5% | 30.6% |
| 3604193 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.59 | 34.0 | 2.67e-01 | 70.4% | 27.6% |
| 5061175 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.58 | 51.0 | 3.86e-01 | 98.6% | 70.9% |
| 5038021 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.56 | 50.0 | 3.51e-01 | 100.0% | 57.5% |
| 3411570 | 2007.2.3.24 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PF27561 | 0.55 | 46.0 | 2.97e-01 | 100.0% | 90.8% |
| 5066622 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.55 | 46.0 | 3.27e-01 | 100.0% | 65.5% |
| 4990247 | 2007.1.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DJ-1_PfpI | 0.54 | 39.0 | 2.93e-01 | 76.1% | 52.2% |
| 3315057 | 247.1.1.9 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DRMBL | 0.53 | 42.0 | 3.06e-01 | 87.3% | 31.7% |
| 394933 | 2007.1.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DJ-1_PfpI | 0.53 | 40.0 | 2.93e-01 | 85.9% | 55.8% |
| 4963595 | 7512.1.1.31 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 | 0.52 | 46.0 | 3.56e-01 | 100.0% | 69.4% |
| 3944717 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 43.0 | 3.07e-01 | 98.6% | 76.8% |
| 4947821 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.51 | 44.0 | 3.32e-01 | 100.0% | 54.1% |
| 4453231 | 2007.1.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DJ-1_PfpI | 0.51 | 36.0 | 2.74e-01 | 74.6% | 41.7% |
D2
medium
residues 72-157
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7tm7B01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.62 | 48.0 | 3.03e-01 | 82.6% | 55.8% |