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MH590603.1__AXH70514.1__SEA_DAREDEVIL_127__00127
Bact-VirMH590603.1__AXH70514.1__SEA_DAREDEVIL_127__00127
Identity
- Accession:
- MH590603 ↗
- Kingdom:
- phage
Quality
90.9
mean pLDDT
Taxonomy
TaxID: 2283286
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-93
Domain cluster:
rep: MF356679.1__ASR76360.1__D6_70__00070__D13-96
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05015.19 best | HigB-like_toxin | 49.0 | 9.90e-13 | 88.4% | 58.2% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mcxF00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.93 | 86.0 | 8.43e-01 | 100.0% | 91.2% |
| 7bwfA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.78 | 62.0 | 6.24e-01 | 100.0% | 85.1% |
| 4ml0B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.76 | 63.0 | 6.27e-01 | 100.0% | 85.6% |
| 6n90A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.73 | 62.0 | 6.21e-01 | 100.0% | 90.9% |
| 5cw7B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.68 | 58.0 | 5.63e-01 | 100.0% | 84.0% |
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.63 | 53.0 | 5.24e-01 | 100.0% | 87.8% |
| 5ov3B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 40.0 | 2.77e-01 | 74.4% | 95.0% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 35.0 | 3.51e-01 | 93.0% | 61.4% |
| 6h5hA00 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.55 | 37.0 | 4.07e-01 | 93.0% | 84.5% |
| 5hy7B02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 39.0 | 2.63e-01 | 74.4% | 22.6% |
| 1szzA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.54 | 37.0 | 2.98e-01 | 83.7% | 35.1% |
| 3g5kA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.54 | 41.0 | 3.17e-01 | 83.7% | 37.7% |
| 2gprA00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.53 | 39.0 | 3.29e-01 | 79.1% | 81.8% |
| 1f3zA00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.52 | 38.0 | 3.22e-01 | 77.9% | 82.7% |
| 1dxkA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 45.0 | 3.40e-01 | 98.8% | 94.1% |
| 1qy9A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.50 | 45.0 | 3.65e-01 | 100.0% | 99.4% |
| 3t0qA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.50 | 41.0 | 2.85e-01 | 90.7% | 64.8% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1124757 | 4312.1.1.2 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB-like_toxin | 0.91 | 83.0 | 8.11e-01 | 100.0% | 89.2% |
| 3165163 | 4312.1.1.2 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB-like_toxin | 0.91 | 85.0 | 8.35e-01 | 98.8% | 93.3% |
| 5032565 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.79 | 64.0 | 6.49e-01 | 100.0% | 87.1% |
| 2629016 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.78 | 62.0 | 6.24e-01 | 100.0% | 85.1% |
| 4967379 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.76 | 61.0 | 6.14e-01 | 100.0% | 85.9% |
| 1297412 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.76 | 64.0 | 6.26e-01 | 100.0% | 84.6% |
| 4994192 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.75 | 58.0 | 6.04e-01 | 100.0% | 88.7% |
| 2807914 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.75 | 62.0 | 6.18e-01 | 100.0% | 85.4% |
| 5062498 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.74 | 59.0 | 6.02e-01 | 100.0% | 87.1% |
| 3604507 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.74 | 60.0 | 5.81e-01 | 100.0% | 78.7% |
| 5027871 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.73 | 61.0 | 5.99e-01 | 100.0% | 83.9% |
| 5016951 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.73 | 58.0 | 5.67e-01 | 100.0% | 77.9% |
| 2549544 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.73 | 62.0 | 6.21e-01 | 100.0% | 90.9% |
| 4948982 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.72 | 59.0 | 5.86e-01 | 100.0% | 84.4% |
| 3165472 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.72 | 62.0 | 6.00e-01 | 100.0% | 84.2% |
| 4937462 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.72 | 62.0 | 5.99e-01 | 100.0% | 84.2% |
| 1877168 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.69 | 58.0 | 5.71e-01 | 100.0% | 85.9% |
| 5031302 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.68 | 62.0 | 5.82e-01 | 100.0% | 89.5% |
| 166546 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.63 | 53.0 | 5.24e-01 | 100.0% | 87.8% |
| 3789364 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 45.0 | 2.95e-01 | 97.7% | 17.9% |
| 2663449 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.59 | 42.0 | 3.67e-01 | 75.6% | 88.5% |
| 3269369 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.58 | 40.0 | 2.55e-01 | 70.9% | 16.8% |
| 3253837 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 38.0 | 2.60e-01 | 70.9% | 89.7% |
| 1649977 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.56 | 35.0 | 3.48e-01 | 93.0% | 60.0% |
| 3167877 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.56 | 39.0 | 2.41e-01 | 74.4% | 13.5% |
| 3930546 | 5.1.4.90 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Itfg2 | 0.54 | 37.0 | 2.49e-01 | 70.9% | 23.6% |
| 3610098 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.54 | 38.0 | 3.16e-01 | 73.3% | 65.3% |
| 3965954 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.53 | 36.0 | 2.36e-01 | 70.9% | 16.7% |
| 5045692 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 36.0 | 2.49e-01 | 74.4% | 21.2% |
| 3240986 | 331.18.1.7 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › DUF3557 | 0.50 | 42.0 | 3.90e-01 | 93.0% | 91.8% |