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MH590603.1__AXH70546.1__SEA_DAREDEVIL_160__00160
Bact-VirMH590603.1__AXH70546.1__SEA_DAREDEVIL_160__00160
Identity
- Accession:
- MH590603 ↗
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Taxonomy
TaxID: 2283286
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 117-175
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i1kA00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.58 | 41.0 | 3.38e-01 | 76.3% | 90.7% |
| 1xp4A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 46.0 | 3.11e-01 | 98.3% | 87.4% |
| 7dd9A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.54 | 41.0 | 2.72e-01 | 84.7% | 65.8% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 43.0 | 3.43e-01 | 100.0% | 75.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024359 | 12.1.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C | 0.63 | 39.0 | 3.52e-01 | 98.3% | 46.3% |
| 3650852 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.55 | 38.0 | 3.15e-01 | 76.3% | 100.0% |
| 4608224 | 331.1.1.22 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF5483 | 0.54 | 45.0 | 3.93e-01 | 96.6% | 81.1% |
| 3218163 | 207.1.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 | 0.52 | 42.0 | 2.91e-01 | 93.2% | 46.1% |
| 4965282 | 880.1.1.4 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › PF30495 | 0.51 | 43.0 | 2.64e-01 | 100.0% | 28.5% |
D2
high
residues 233-277_349-424
Domain cluster:
rep: IMGVR_UViG_3300009642_000007-3300009642-Ga0123331_100023678__D169-200_254-310
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jubA02 | 2.20.25.370 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ipi1, C-terminal domain | 0.62 | 18.0 | 3.06e-01 | 80.2% | 74.4% |
| 3rq1D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 28.0 | 2.66e-01 | 90.9% | 38.6% |
| 3kkiA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 31.0 | 2.88e-01 | 95.0% | 45.5% |
| 7r2xA02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 36.0 | 2.87e-01 | 73.6% | 90.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5010030 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.64 | 24.0 | 3.62e-01 | 90.9% | 92.5% |
| 4260807 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 25.0 | 3.12e-01 | 90.9% | 67.1% |
| 3088555 | 3523.1.1.2 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptD_N | 0.52 | 37.0 | 3.48e-01 | 73.6% | 68.5% |
D3
medium
residues 3-111_176-218
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 30.0 | 4.02e-01 | 73.0% | 97.5% |
| 3rotA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 37.0 | 3.96e-01 | 85.5% | 74.5% |
| 3hcwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 34.0 | 3.57e-01 | 85.5% | 72.0% |
| 1tezA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 35.0 | 3.84e-01 | 83.6% | 85.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3432106 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.53 | 33.0 | 3.61e-01 | 96.7% | 76.2% |
| 3179531 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 40.0 | 3.06e-01 | 80.9% | 62.6% |
| 3352484 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.52 | 39.0 | 2.94e-01 | 78.3% | 65.9% |
| 3315222 | 243.1.1.89 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF7074 | 0.52 | 33.0 | 3.97e-01 | 80.3% | 98.0% |